RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 PRTN3P24158 256 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 BLVRBP30043 206 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 PPICP45877 212 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 LDLRAD2Q5SZI1 272 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 OR52E2Q8NGJ4 325 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 OR5W2Q8NH69 310 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 SLC7A6Q92536 515 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 MBD6Q96DN6 1003 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 AURKBQ96GD4 344 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 ACY3Q96HD9 319 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF184Q99676 751 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 KCTD14Q9BQ13 255 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 MAP6D1Q9H9H5 199 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 GPR84Q9NQS5 396 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 MRPL16Q9NX20 251 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 DNAJC27Q9NZQ0 273 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 SCP2D1Q9UJQ7 156 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 TRAPPC2LQ9UL33 140 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF257Q9Y2Q1 563 aa6.13□□□□□ -1.43
PDGFRA-206ENST00000508170 TNS1Q9HBL0 1735 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 I3L521 148 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 ITM2AO43736 263 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 MMP23AO75900 390 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 T-ENOLP0DO92 83 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 TNFRSF1BP20333 461 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 RFX2P48378 723 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 HBA1P69905 142 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 MEF2CQ06413 473 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 RBMS2Q15434 407 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 SCGB2B2Q4G0G5 96 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 OR8I2Q8N0Y5 310 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 GPR26Q8NDV2 337 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 OR13C8Q8NGS7 320 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 BLNKQ8WV28 456 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 KIR2DL4Q99706 377 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 SULT4A1Q9BR01 284 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 PBDC1Q9BVG4 233 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 PTGES2Q9H7Z7 377 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 METTL1Q9UBP6 276 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 VAX2Q9UIW0 290 aa6.12□□□□□ -1.43
PDGFRA-206ENST00000508170 hADV38S2A0JD32 116 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 A6NDN8 102 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 UNC119BA6NIH7 251 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 ATF1P18846 271 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 CD38P28907 300 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 GDF5P43026 501 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 COPZ1P61923 177 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 PRDX4Q13162 271 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 HTR4Q13639 388 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 IAH1Q2TAA2 248 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 TMEM255AQ5JRV8 349 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 RSBN1Q5VWQ0 802 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 OOSP2Q86WS3 158 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 OR11H6Q8NGC7 330 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 OR10R2Q8NGX6 335 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 SECTM1Q8WVN6 248 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 BMFQ96LC9 184 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 NKX6-2Q9C056 277 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 PLEKHA3Q9HB20 300 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 DMAC2Q9NW81 257 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 EHFQ9NZC4 300 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 KIF13BQ9NQT8 1826 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 LOC102724200A0A096LPH7 203 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 TMEM218A2RU14 115 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 LINC00473A8K010 186 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 H7C1C5 153 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNHIT1O43257 154 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 SPAG7O75391 227 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 TOMM40O96008 361 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 ZBTB25P24278 435 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 SRIP30626 198 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 HNRNPA3P51991 378 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 RND2P52198 227 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 DEFA1P59665 94 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 LCN6P62502 163 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 RPS27AP62979 156 aaKnown RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 TNFAIP6P98066 277 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 ZNF763Q0D2J5 394 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 RUNX3Q13761 415 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 BEAN1Q3B7T3 259 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 TMEM69Q5SWH9 247 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 GLYATQ6IB77 296 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 GSG1LQ6UXU4 331 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 IZUMO2Q6UXV1 221 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 HSD17B13Q7Z5P4 300 aaPredicted RBP6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 OR1N2Q8NGR9 330 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 MCHR1Q99705 422 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 AKIP1Q9NQ31 210 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 SAR1AQ9NR31 198 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 MMP26Q9NRE1 261 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 PCYOX1Q9UHG3 505 aa6.11□□□□□ -1.43
PDGFRA-206ENST00000508170 TRAV8-4A0A0B4J246 113 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 A0A0G2JN53 185 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 CIB4A0PJX0 185 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 RBFOX3A6NFN3 312 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 B4DXG7 233 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 M0R2Z0 102 aa6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 CDX4O14627 284 aaPredicted RBP6.1□□□□□ -1.43
PDGFRA-206ENST00000508170 SNAP91O60641 907 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms