RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 PSMG1O95456 288 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 CD5P06127 495 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 HIST1H1CP16403 213 aaKnown RBP2.13□□□□□ -2.07
USP53-204ENST00000507906 CXCL3P19876 107 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 GADD45AP24522 165 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 IFNGR2P38484 337 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 HSPA13P48723 471 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 INPP1P49441 399 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 BLVRAP53004 296 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 KLF3P57682 345 aaPredicted RBP2.13□□□□□ -2.07
USP53-204ENST00000507906 KRTAP10-8P60410 259 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 MLLT11Q13015 90 aaPredicted RBP2.13□□□□□ -2.07
USP53-204ENST00000507906 C1DQ13901 141 aaKnown RBP2.13□□□□□ -2.07
USP53-204ENST00000507906 PDGFRLQ15198 375 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 MMDQ15546 238 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 KRTAP13-3Q3SY46 172 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 DNAL1Q4LDG9 190 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 ZCWPW2Q504Y3 356 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 EBLN2Q6P2I7 272 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 Q6ZRU5 148 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 TMEM75Q8N9X5 138 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 OR52E4Q8NGH9 312 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 TNFAIP8L1Q8WVP5 186 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 OR2V2Q96R30 315 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 C1orf50Q9BV19 199 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 METTL9Q9H1A3 318 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 ZNF286AQ9HBT8 521 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 OR5V1Q9UGF6 321 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 PHLDA3Q9Y5J5 127 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 R4GN34 69 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 U3KQK5 164 aa2.13□□□□□ -2.07
USP53-204ENST00000507906 ARGFXA6NJG6 315 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 RTL8CO15255 209 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 SOX14O95416 240 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 IGHMP01871 453 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 CTSEP14091 401 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 GTF2BQ00403 316 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 APOFQ13790 326 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 KRTAP25-1Q3LHN0 102 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 TRMT12Q53H54 448 aaKnown RBP2.12□□□□□ -2.07
USP53-204ENST00000507906 HENMT1Q5T8I9 393 aaKnown RBP2.12□□□□□ -2.07
USP53-204ENST00000507906 ZNF660Q6AZW8 331 aaPredicted RBP2.12□□□□□ -2.07
USP53-204ENST00000507906 CPNE9Q8IYJ1 553 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 DTD1Q8TEA8 209 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 YIPF5Q969M3 257 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 APOBEC3DQ96AK3 386 aaPredicted RBP2.12□□□□□ -2.07
USP53-204ENST00000507906 CMBLQ96DG6 245 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 ARL6Q9H0F7 186 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 ZNF443Q9Y2A4 671 aaPredicted RBP2.12□□□□□ -2.07
USP53-204ENST00000507906 LINC00588Q9Y4M8 146 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 TRIP11Q15643 1979 aa2.12□□□□□ -2.07
USP53-204ENST00000507906 COL1A2P08123 1366 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 DYSFO75923 2080 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 CRB1P82279 1406 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 A0A1W2PQ67 120 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 LECT2O14960 151 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 ARL6IP5O75915 188 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 ATP5G1P05496 136 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 PRPS1L1P21108 318 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 LINC00313P59037 77 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 RPS11P62280 158 aaKnown RBP eCLIP2.11□□□□□ -2.07
USP53-204ENST00000507906 UBE2IP63279 158 aaKnown RBP2.11□□□□□ -2.07
USP53-204ENST00000507906 BSPH1Q075Z2 132 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 MED21Q13503 144 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 COQ5Q5HYK3 327 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 PAGE2Q7Z2X7 111 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 FER1L6-AS1Q8NA97 138 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 ZNF680Q8NEM1 530 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 SPPL2BQ8TCT7 592 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 HAVCR2Q8TDQ0 301 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 ZNF721Q8TF20 911 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 CMTM5Q96DZ9 223 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 SMIM12Q96EX1 92 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 KCTD7Q96MP8 289 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 RTBDNQ9BSG5 229 aaPredicted RBP2.11□□□□□ -2.07
USP53-204ENST00000507906 CDCA4Q9BXL8 241 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 MROQ9BYG7 248 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 SLC22A4Q9H015 551 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 GTSF1LQ9H1H1 148 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 C11orf49Q9H6J7 331 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.11□□□□□ -2.07
USP53-204ENST00000507906 MYO3BQ8WXR4 1341 aa2.11□□□□□ -2.07
USP53-204ENST00000507906 ADCY9O60503 1353 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 OR6C70A6NIJ9 312 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 LEUTXA8MZ59 168 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 B4DEV8 164 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 C4orf51C9J302 202 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 KLHL2O95198 593 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 DEXIO95424 95 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 GPR75O95800 540 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 FBP1P09467 338 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 OR13C7P0DN81 318 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 HRES1P13985 223 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 ORM2P19652 201 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 PSMA1P25786 263 aaKnown RBP2.1□□□□□ -2.07
USP53-204ENST00000507906 PSMB3P49720 205 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 FOXA1P55317 472 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 MGAT3Q09327 533 aa2.1□□□□□ -2.07
USP53-204ENST00000507906 IGFBP7Q16270 282 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms