RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 C6orf183Q5T699 404 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 C6orf201Q7Z4U5 140 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 PRR18Q8N4B5 295 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 TSPAN14Q8NG11 270 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 OR10A7Q8NGE5 316 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 OR4F5Q8NH21 305 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 CHCHD6Q9BRQ6 235 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 LPAR5Q9H1C0 372 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 MMP28Q9H239 520 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 LINC00574Q9H8X3 128 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 PLEKHJ1Q9NW61 149 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 DPM3Q9P2X0 92 aa10.58□□□□□ -0.72
TCOF1-209ENST00000506630 VWFP04275 2813 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 IGHV3-43A0A0B4J1X8 118 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 TMEM272A0A1B0GTI8 110 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 IFITM5A6NNB3 132 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 VGLL3A8MV65 326 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 LEUTXA8MZ59 168 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 C12orf77C9JDV5 145 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 C15orf65H3BRN8 121 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 SDCBPO00560 298 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-209ENST00000506630 SOCS1O15524 211 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 SPINT2O43291 252 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 NDUFA7O95182 113 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 IGLV1-47P01700 117 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 IGHV3-43DP0DP04 118 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 CD36P16671 472 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 JUNBP17275 347 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-209ENST00000506630 GADD45AP24522 165 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 C2orf76Q3KRA6 126 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 TRAT1Q6PIZ9 186 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 GAPTQ8N292 157 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 MRPL30Q8TCC3 161 aaKnown RBP10.57□□□□□ -0.72
TCOF1-209ENST00000506630 CREB3L1Q96BA8 519 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 FAAP24Q9BTP7 215 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 CHMP1AQ9HD42 196 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-209ENST00000506630 RAB18Q9NP72 206 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 RAB9BQ9NP90 201 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 KCNIP1Q9NZI2 227 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 PSG11Q9UQ72 335 aa10.57□□□□□ -0.72
TCOF1-209ENST00000506630 AMMECR1Q9Y4X0 333 aaPredicted RBP10.57□□□□□ -0.72
TCOF1-209ENST00000506630 A0A0B4J203 849 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 BUB1B-PAK6H3BSN5 160 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 J3QR06 171 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 LDLRAD4O15165 306 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 HBZP02008 142 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 RCC1P18754 421 aaPredicted RBP10.56□□□□□ -0.72
TCOF1-209ENST00000506630 CEACAM3P40198 252 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 VEGFCP49767 419 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 ARHGDIBP52566 201 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 PLA2G7Q13093 441 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 TPTE2P1Q5T6R2 138 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 HIST2H2BDQ6DRA6 164 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 OR10X1Q8NGY0 326 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 OR1L1Q8NH94 360 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 SETD6Q8TBK2 473 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 TOMM40LQ969M1 308 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 KCTD7Q96MP8 289 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 RNF167Q9H6Y7 350 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 LIN7BQ9HAP6 207 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 GFOD1Q9NXC2 390 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 FBLN5Q9UBX5 448 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 PITPNC1Q9UKF7 332 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 TCF19Q9Y242 345 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 NOTCH1P46531 2555 aa10.56□□□□□ -0.72
TCOF1-209ENST00000506630 A0A1W2PPE3 182 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 NOTOA8MTQ0 251 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 SLC2A2P11168 524 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-209ENST00000506630 DYNLT3P51808 116 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 KRTAP10-3P60369 221 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 MXD1Q05195 221 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 OLFML2AQ68BL7 652 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 FAM53AQ6NSI3 398 aaPredicted RBP10.55□□□□□ -0.72
TCOF1-209ENST00000506630 Q6ZSV7 163 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 Q6ZTK2 550 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 TPRA1Q86W33 373 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 NR2C2APQ86WQ0 139 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 TMEM219Q86XT9 240 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 OR56B1Q8NGI3 324 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 OR10V1Q8NGI7 309 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 PIFOQ8TCI5 191 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 RPEQ96AT9 228 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 CITED1Q99966 193 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 TAF9BQ9HBM6 251 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 MBNL3Q9NUK0 354 aaKnown RBP10.55□□□□□ -0.72
TCOF1-209ENST00000506630 GNG12Q9UBI6 72 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 RAB22AQ9UL26 194 aa10.55□□□□□ -0.72
TCOF1-209ENST00000506630 CLPSL1A2RUU4 121 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 CHST1O43916 411 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 BRS3P32247 399 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 SDC2P34741 201 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 MNDAP41218 407 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 EFNB2P52799 333 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 LOXL3P58215 753 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 TMEM30BQ3MIR4 351 aa10.54□□□□□ -0.72
TCOF1-209ENST00000506630 TIMM50Q3ZCQ8 353 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms