RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 SAT2Q96F10 170 aaPredicted RBP14.55□□□□□ -0.08
TRAPPC11-204ENST00000505676 NCOR1P1Q9H4R4 102 aa14.55□□□□□ -0.08
TRAPPC11-204ENST00000505676 NUP50Q9UKX7 468 aa14.55□□□□□ -0.08
TRAPPC11-204ENST00000505676 INTS1Q8N201 2190 aaKnown RBP14.55□□□□□ -0.08
TRAPPC11-204ENST00000505676 MUC6Q6W4X9 2439 aa14.55□□□□□ -0.08
TRAPPC11-204ENST00000505676 BORCS7-ASMTA0A0B4J1R7 106 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 SERPINE2P07093 398 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 NKX2-1P43699 371 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 TESK1Q15569 626 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 NMSQ5H8A3 153 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 TMEM108Q6UXF1 575 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 TCTEX1D1Q8N7M0 179 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 UBAC2Q8NBM4 344 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 LRRC29Q8WV35 223 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 LSM10Q969L4 123 aaKnown RBP14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 PLEKHF2Q9H8W4 249 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 RAB9BQ9NP90 201 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 FAM212BQ9NTI7 297 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 LUZP4Q9P127 313 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 SHANK1Q9Y566 2161 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 RAB19A4D1S5 217 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 C16orf97H3BN30 126 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 PSPNO60542 156 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 PTAFRP25105 342 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 ZNF826PQ6ZT77 177 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 FOXRED2Q8IWF2 684 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 TMEM171Q8WVE6 324 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 BARX1Q9HBU1 254 aaPredicted RBP14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 ESPL1Q14674 2120 aa14.54□□□□□ -0.08
TRAPPC11-204ENST00000505676 A0A1B0GU03 582 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 TNFSF4P23510 183 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 CISD2Q8N5K1 135 aaKnown RBP14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 RELL2Q8NC24 303 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 NINJ1Q92982 152 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 MEGF10Q96KG7 1140 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 SLC25A31Q9H0C2 315 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 JKAMPQ9P055 326 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 OR1A1Q9P1Q5 309 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 DUSP13Q9UII6 198 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 ZDHHC8Q9ULC8 765 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 FZR1Q9UM11 496 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 RBM7Q9Y580 266 aaKnown RBP14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 RIF1Q5UIP0 2472 aaKnown RBP14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 TEX46H3BTG2 121 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 BMP5P22003 454 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 CD40P25942 277 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 IL2RGP31785 369 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 OR3A1P47881 315 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 IGFBP7Q16270 282 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 OR52M1Q8NGK5 317 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 DIRC2Q96SL1 478 aa14.53□□□□□ -0.08
TRAPPC11-204ENST00000505676 GVINP1Q7Z2Y8 2422 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 A0A0G2JNJ9 132 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 NKX2-6A6NCS4 301 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 SPINK2P20155 84 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 TMEM33P57088 247 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 NHLH1Q02575 133 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 STPG2Q8N412 459 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 SNX22Q96L94 193 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 UFSP2Q9NUQ7 469 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 FBXL17Q9UF56 701 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 Q9UFV3 132 aa14.52□□□□□ -0.08
TRAPPC11-204ENST00000505676 WNT9BO14905 357 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 GFRA3O60609 400 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 ATG12O94817 140 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 ADH4P08319 380 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 PRDX2P32119 198 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 CEACAM6P40199 344 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 HTD2P86397 168 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 COL10A1Q03692 680 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 KRBOX4Q5JUW0 171 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 FAM74A1Q5RGS3 127 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 ZNF645Q8N7E2 425 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 ARV1Q9H2C2 271 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 IL19Q9UHD0 177 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 RCL1Q9Y2P8 373 aaKnown RBP14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 ID3Q02535 119 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 ARL11Q969Q4 196 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 MARC2Q969Z3 335 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 C11orf1Q9H5F2 150 aa14.51□□□□□ -0.09
TRAPPC11-204ENST00000505676 ZSCAN5BA6NJL1 495 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 C12orf77C9JDV5 145 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 MGST3O14880 152 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 SPINT2O43291 252 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 KCNAB3O43448 404 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 ADAM20O43506 726 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 GZMHP20718 246 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 GABRA2P47869 451 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 BLOC1S1P78537 153 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 BAXQ07812 192 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 FAM27E3Q08E93 113 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 CR1LQ2VPA4 569 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 DMBX1Q8NFW5 382 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 COQ2Q96H96 371 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 OR2V2Q96R30 315 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 TAS2R3Q9NYW6 316 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 LPAR3Q9UBY5 353 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 VSTM5A8MXK1 200 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 VAMP2P63027 116 aa14.5□□□□□ -0.09
TRAPPC11-204ENST00000505676 CATR1Q13166 79 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms