RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	TMEM80	Q96HE8	168 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	ABCG5	Q9H222	651 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	C8orf4	Q9NR00	106 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	ERGIC3	Q9Y282	383 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	MRPS28	Q9Y2Q9	187 aa	Known RBP	12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	CCL24	O00175	119 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	EBAG9	O00559	213 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	RGS11	O94810	467 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	MT-ND4	P03905	459 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	ELANE	P08246	267 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	MAPK3	P27361	379 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	ETV1	P50549	477 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	EGFEM1P	Q0D2K5	195 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	FOXE3	Q13461	319 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	EBI3	Q14213	229 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	AWAT2	Q6E213	333 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	RAB12	Q6IQ22	244 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	ZNF497	Q6ZNH5	498 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	GHSR	Q92847	366 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	DIMT1	Q9UNQ2	313 aa	Known RBP	12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	PEX16	Q9Y5Y5	336 aa		12.94	□□□□□ -0.34
DDR1-256	ENST00000505066	CMYA5	Q8N3K9	4069 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	WI2-2373I1.2	A0A1W2PRP0	233 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	CRTAP	O75718	401 aa	Predicted RBP	12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	DIAPH2-AS1	Q14236	149 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	SYT6	Q5T7P8	510 aa	Predicted RBP	12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	C9orf66	Q5T8R8	295 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	OR2G6	Q5TZ20	316 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	STEAP3	Q658P3	488 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	GLIPR1L1	Q6UWM5	242 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	CDH26	Q8IXH8	852 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	S1PR3	Q99500	378 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	SLC29A1	Q99808	456 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	ABRACL	Q9P1F3	81 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	LRRC42	Q9Y546	428 aa		12.93	□□□□□ -0.34
DDR1-256	ENST00000505066	IGHV3-43	A0A0B4J1X8	118 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	FAM90A10P	A6NDY2	464 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	EFCAB10	A6NFE3	127 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	FAM90A7P	A6NKC0	464 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	FAM90A23P	A8MXZ1	464 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	MYL12B	O14950	172 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	OGG1	O15527	345 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	GLA	P06280	429 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	NHLRC4	P0CG21	123 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	IGHV3-43D	P0DP04	118 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	CAPG	P40121	348 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	KRTAP10-11	P60412	298 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	LCNL1	Q6ZST4	164 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	NKAIN3	Q8N8D7	197 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	UBALD1	Q8TB05	177 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	RGP1	Q92546	391 aa	Predicted RBP	12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	MUL1	Q969V5	352 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	NEDD4L	Q96PU5	975 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	B9D2	Q9BPU9	175 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	ZNF251	Q9BRH9	671 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	CHCHD6	Q9BRQ6	235 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	SELENOI	Q9C0D9	397 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	CST11	Q9H112	138 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	OR2S2	Q9NQN1	319 aa		12.92	□□□□□ -0.34
DDR1-256	ENST00000505066	PRKDC	P78527	4128 aa	Known RBP	12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	C15orf65	H3BRN8	121 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	FUT3	P21217	361 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	CDX1	P47902	265 aa	Predicted RBP	12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	KIR2DS1	Q14954	304 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	MMD	Q15546	238 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	SMN1	Q16637	294 aa	Known RBP	12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	UTF1	Q5T230	341 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	SLC25A48	Q6ZT89	311 aa	Known RBP	12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	OR10V1	Q8NGI7	309 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	OR4K15	Q8NH41	348 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	TFAP2C	Q92754	450 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	DCLRE1B	Q9H816	532 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	KIAA1456	Q9P272	454 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	GHRL	Q9UBU3	117 aa		12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	ZNF107	Q9UII5	783 aa	Predicted RBP	12.91	□□□□□ -0.34
DDR1-256	ENST00000505066	GPX5	O75715	221 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	HBZ	P02008	142 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	MAS1	P04201	325 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	RPLP1	P05386	114 aa	Known RBP	12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	FST	P19883	344 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	DOC2B	Q14184	412 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	ZNF554	Q86TJ5	538 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	DHRSX	Q8N5I4	330 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	APH1B	Q8WW43	257 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	WWC2-AS2	Q96NR7	200 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	P2RX4	Q99571	388 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	VCX	Q9H320	206 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	STEAP1	Q9UHE8	339 aa		12.9	□□□□□ -0.34
DDR1-256	ENST00000505066	TRBV5-5	A0A0J9YX44	114 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	SEC14L6	B5MCN3	397 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	C12orf77	C9JDV5	145 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066		H0YHG0	523 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	LANCL1	O43813	399 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	WBP4	O75554	376 aa	Known RBP	12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	UBB	P0CG47	229 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	MGMT	P16455	207 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	ST3GAL4	Q11206	333 aa		12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	DMKN	Q6E0U4	476 aa	Predicted RBP	12.89	□□□□□ -0.35
DDR1-256	ENST00000505066	XAF1	Q6GPH4	301 aa		12.89	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms