RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 THNSL2Q86YJ6 484 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 BCL6BQ8N143 479 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-220ENST00000505005 OR8H3Q8N146 312 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 FGFRL1Q8N441 504 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 LINC00311Q8N616 119 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 TPRX1Q8N7U7 411 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 C3orf56Q8N813 242 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 OR10X1Q8NGY0 326 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 DYNC2LI1Q8TCX1 351 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 EDARADDQ8WWZ3 215 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 RPEQ96AT9 228 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 ORAI1Q96D31 301 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 COQ2Q96H96 371 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 KIRREL1Q96J84 757 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 C1orf147Q96MC9 270 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-220ENST00000505005 TSC22D3Q99576 134 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 NPFFR1Q9GZQ6 430 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 MMP28Q9H239 520 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 BANF2Q9H503 90 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 CHMP1AQ9HD42 196 aaPredicted RBP8.02□□□□□ -1.13
NR1I3-220ENST00000505005 MBNL3Q9NUK0 354 aaKnown RBP8.02□□□□□ -1.13
NR1I3-220ENST00000505005 JPT1Q9UK76 154 aa8.02□□□□□ -1.13
NR1I3-220ENST00000505005 BUB1B-PAK6H3BSN5 160 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 J3QR06 171 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 F2RL2O00254 374 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 HSPB6O14558 160 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 ITGB1BP1O14713 200 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 TFF1P04155 84 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 GAPDHP04406 335 aaKnown RBP8.01□□□□□ -1.13
NR1I3-220ENST00000505005 CD3GP09693 182 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 NFYBP25208 207 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 CHATP28329 748 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 SOX6P35712 828 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 TALDO1P37837 337 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 LSAMPQ13449 338 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 SPCS2Q15005 226 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 HLA-DRB5Q30154 266 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 FAM27D1Q5T7N8 215 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 RUSC1-AS1Q66K80 236 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 PDZD9Q8IXQ8 264 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 TMEM104Q8NE00 496 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 OR51D1Q8NGF3 324 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 MRGPRDQ8TDS7 321 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 RAB3CQ96E17 227 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 ZNF48Q96MX3 618 aaPredicted RBP8.01□□□□□ -1.13
NR1I3-220ENST00000505005 CHCHD6Q9BRQ6 235 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 OR51E2Q9H255 320 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 LIN7BQ9HAP6 207 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 C12orf4Q9NQ89 552 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 DIABLOQ9NR28 239 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 GNG12Q9UBI6 72 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 ATRQ13535 2644 aa8.01□□□□□ -1.13
NR1I3-220ENST00000505005 SDCBPO00560 298 aaPredicted RBP8□□□□□ -1.13
NR1I3-220ENST00000505005 YPEL1O60688 119 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 IGLV1-47P01700 117 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 CTXN2P0C2S0 81 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 VBP1P61758 197 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 NCS1P62166 190 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 QRFPP83859 136 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 KLRD1Q13241 179 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 INSL4Q14641 139 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 SSX2Q16385 188 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 C17orf58Q2M2W7 97 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 NKAPLQ5M9Q1 402 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 HCP5Q6MZN7 132 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 SHISA2Q6UWI4 295 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 RNF144BQ7Z419 303 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 OR4C13Q8NGP0 309 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 OR13A1Q8NGR1 328 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 PLPPR1Q8TBJ4 325 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 CMTM3Q96MX0 182 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 YPEL2Q96QA6 119 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 CMSS1Q9BQ75 279 aaKnown RBP8□□□□□ -1.13
NR1I3-220ENST00000505005 LPAR5Q9H1C0 372 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 PPIL3Q9H2H8 161 aaKnown RBP8□□□□□ -1.13
NR1I3-220ENST00000505005 MMP27Q9H306 513 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 GFOD1Q9NXC2 390 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 ING3Q9NXR8 418 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 PIPOXQ9P0Z9 390 aa8□□□□□ -1.13
NR1I3-220ENST00000505005 A0A075B6Q4 140 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 LOC100506127A0A0U1RQW1 187 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 A0A1W2PP11 408 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 CLPSL1A2RUU4 121 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 FAM181BA6NEQ2 426 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 H3BUX3 64 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 GPR137BO60478 399 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 TSPAN9O75954 239 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 GSTP1P09211 210 aaKnown RBP7.99□□□□□ -1.13
NR1I3-220ENST00000505005 ZBTB25P24278 435 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 VEGFCP49767 419 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 RAG2P55895 527 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 PNLIPRP3Q17RR3 467 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 PLA1AQ53H76 456 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 FAM71F2Q6NXP2 309 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 SFXN4Q6P4A7 337 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 TCF23Q7RTU1 214 aa7.99□□□□□ -1.13
NR1I3-220ENST00000505005 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.99□□□□□ -1.13
NR1I3-220ENST00000505005 OR8H1Q8NGG4 311 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms