RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 ERVS71-1P61550 626 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 CCL20P78556 96 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 RUNX1Q01196 453 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 PMP22Q01453 160 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF154Q13106 437 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 IZUMO4Q1ZYL8 232 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 TMPRSS7Q7RTY8 843 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF295-AS1Q8N0V1 137 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 RARRES2Q99969 163 aa8.37□□□□□ -1.07
CLIP1-204ENST00000501271 ESRP2Q9H6T0 727 aaKnown RBP8.37□□□□□ -1.07
CLIP1-204ENST00000501271 ZFHX4Q86UP3 3567 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 IGHV3-64DA0A0J9YX35 117 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 SIRPB1O00241 398 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 SMPD2O60906 423 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 DAOP14920 347 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF14P17017 642 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-204ENST00000501271 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
CLIP1-204ENST00000501271 TBC1D28Q2M2D7 210 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF766Q5HY98 468 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 SPSB3Q6PJ21 355 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 PRR18Q8N4B5 295 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 C15orf54Q8N8G6 183 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 UBALD1Q8TB05 177 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 GPR146Q96CH1 333 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 OR2J1Q9GZK6 312 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 CFAP47Q6ZTR5 3102 aa8.36□□□□□ -1.07
CLIP1-204ENST00000501271 H3BP45 60 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 M0R036 132 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 WRBO00258 174 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 OR2H2O95918 312 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 OR13C7P0DN81 318 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 MMP9P14780 707 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 AKR1D1P51857 326 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 ARG2P78540 354 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 BAXQ07812 192 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 HABP2Q14520 560 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-204ENST00000501271 TESK1Q15569 626 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 ALKBH6Q3KRA9 238 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 SCCPDHQ8NBX0 429 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 LFNGQ8NES3 379 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 OR10V1Q8NGI7 309 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 HIST1H2BAQ96A08 127 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 ISOC2Q96AB3 205 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 PBDC1Q9BVG4 233 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 RTL8AQ9BWD3 113 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 SLC35B3Q9H1N7 401 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 DIDO1Q9BTC0 2240 aaKnown RBP8.35□□□□□ -1.07
CLIP1-204ENST00000501271 DSPP15924 2871 aaKnown RBP8.35□□□□□ -1.07
CLIP1-204ENST00000501271 KIAA1324LA8MWY0 1029 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-204ENST00000501271 NPIPB11E5RHQ5 1161 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 SERPINE2P07093 398 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 FOLR2P14207 255 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 SELEP16581 610 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 IDH3GP51553 393 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-204ENST00000501271 ERVK11-1P61568 191 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 ZNF497Q6ZNH5 498 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 Q6ZRM9 215 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 P4HA3Q7Z4N8 544 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 LOXL4Q96JB6 756 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 EGLN1Q9GZT9 426 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 ZDHHC11Q9H8X9 412 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 KCNJ16Q9NPI9 418 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 BIN3Q9NQY0 253 aa8.35□□□□□ -1.07
CLIP1-204ENST00000501271 A0A1B0GW64 132 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 LRP5LA4QPB2 252 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-204ENST00000501271 HSPA12AO43301 675 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 IGHV1-2P23083 117 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 S100GP29377 79 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-204ENST00000501271 PPP1CBP62140 327 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 TMEM267Q0VDI3 215 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-204ENST00000501271 GCNT2Q8N0V5 402 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 KDF1Q8NAX2 398 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-204ENST00000501271 CD300LFQ8TDQ1 290 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 ATP5SQ99766 215 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 PRR14LQ5THK1 2151 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 A0A1W2PPH5 198 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 CDIPTO14735 213 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 LYZL6O75951 148 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 MDH2P40926 338 aaKnown RBP8.34□□□□□ -1.07
CLIP1-204ENST00000501271 SP5Q6BEB4 398 aaPredicted RBP8.34□□□□□ -1.07
CLIP1-204ENST00000501271 TRAPPC2LQ9UL33 140 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 PPP1R3CQ9UQK1 317 aa8.34□□□□□ -1.07
CLIP1-204ENST00000501271 A0A1B0GU03 582 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 RBFOX3A6NFN3 312 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 A6NLC8 198 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 H0YL77 283 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 TXNL1O43396 289 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 IGKV1-5P01602 117 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 WNT2P09544 360 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 PGA5P0DJD9 388 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 OR8G1Q15617 311 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 MOB1BQ7L9L4 216 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 OR8G5Q8NG78 346 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 RNASE11Q8TAA1 199 aaKnown RBP8.33□□□□□ -1.08
CLIP1-204ENST00000501271 SLC25A40Q8TBP6 338 aa8.33□□□□□ -1.08
CLIP1-204ENST00000501271 GNPNAT1Q96EK6 184 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms