RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 ECI1P42126 302 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 GTF2A1P52655 376 aaPredicted RBP9.44□□□□□ -0.9
CNOT4-211ENST00000498534 RBM11P57052 281 aaKnown RBP9.44□□□□□ -0.9
CNOT4-211ENST00000498534 GPR176Q14439 515 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 MPV17LQ2QL34 196 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 Q3ZCU0 254 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 CCDC58Q4VC31 144 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 RPL22L1Q6P5R6 122 aaKnown RBP9.44□□□□□ -0.9
CNOT4-211ENST00000498534 C10orf67Q8IYJ2 551 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 CBR4Q8N4T8 237 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 Q8N6K4 173 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 RNF152Q8N8N0 203 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 Q8N9W7 124 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 OR52I1Q8NGK6 324 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 RTN4IP1Q8WWV3 396 aaPredicted RBP9.44□□□□□ -0.9
CNOT4-211ENST00000498534 TMEM106AQ96A25 262 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 PLSCR3Q9NRY6 295 aa9.44□□□□□ -0.9
CNOT4-211ENST00000498534 LSM4Q9Y4Z0 139 aaKnown RBP9.44□□□□□ -0.9
CNOT4-211ENST00000498534 MCRIP1C9JLW8 97 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 SPINT2O43291 252 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 IGHG4P01861 327 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 OR5H8P0DN80 308 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 GTF2F2P13984 249 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 GABRB1P18505 474 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 SERPINA2P20848 420 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 BDKRB2P30411 391 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 LUMP51884 338 aaPredicted RBP9.43□□□□□ -0.9
CNOT4-211ENST00000498534 DEFB136Q30KP8 78 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 DDI2Q5TDH0 399 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 ZFP1Q6P2D0 407 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 TMEM65Q6PI78 240 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 TMPRSS11AQ6ZMR5 421 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 UBALD1Q8TB05 177 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 ST6GALNAC6Q969X2 333 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 CHCHD6Q9BRQ6 235 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 SPACA1Q9HBV2 294 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 MRPS18AQ9NVS2 196 aaKnown RBP9.43□□□□□ -0.9
CNOT4-211ENST00000498534 GNG12Q9UBI6 72 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 TRAPPC2LQ9UL33 140 aa9.43□□□□□ -0.9
CNOT4-211ENST00000498534 IGHV3-43A0A0B4J1X8 118 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 LOC100130705A0A1B0GUX0 176 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 AIPO00170 330 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 DYNC1I1O14576 645 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 IGHV3-43DP0DP04 118 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 TMEM30BQ3MIR4 351 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 SLC22A6Q4U2R8 563 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 STEAP3Q658P3 488 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF497Q6ZNH5 498 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 TMEM104Q8NE00 496 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 C4orf3Q8WVX3 66 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 PRR25Q96S07 402 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 C9orf16Q9BUW7 83 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 CHCHD3Q9NX63 227 aaKnown RBP9.42□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF581Q9P0T4 197 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 CKLFQ9UBR5 152 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 SCOCQ9UIL1 159 aa9.42□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF736B4DX44 427 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-211ENST00000498534 IGF1P05019 195 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 LIMS3P0CW19 117 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 LIMS4P0CW20 117 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 INSL3P51460 131 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 F2RL1P55085 397 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 RIPK1Q13546 671 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF260Q3ZCT1 412 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 C6orf183Q5T699 404 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 SYT6Q5T7P8 510 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-211ENST00000498534 TRAT1Q6PIZ9 186 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 SLC25A48Q6ZT89 311 aaKnown RBP9.41□□□□□ -0.9
CNOT4-211ENST00000498534 OR11H1Q8NG94 326 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 RGP1Q92546 391 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-211ENST00000498534 MRPS24Q96EL2 167 aaKnown RBP9.41□□□□□ -0.9
CNOT4-211ENST00000498534 KCTD7Q96MP8 289 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 ASCL2Q99929 193 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 FGF20Q9NP95 211 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-211ENST00000498534 BABAM2Q9NXR7 383 aa9.41□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF256Q9Y2P7 627 aaPredicted RBP9.41□□□□□ -0.9
CNOT4-211ENST00000498534 C12orf77C9JDV5 145 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 C3orf84H3BNL1 204 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 H3BNX3 289 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 DCKP27707 260 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 PSMB8P28062 276 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF137PP52743 207 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 CFHR3Q02985 330 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 CT45A1Q5HYN5 189 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 RAB12Q6IQ22 244 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 FAM53AQ6NSI3 398 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-211ENST00000498534 PRR18Q8N4B5 295 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 FAM71E2Q8N5Q1 922 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 OR1N2Q8NGR9 330 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 CT45A3Q8NHU0 189 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 UBE2E2Q96LR5 201 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF184Q99676 751 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-211ENST00000498534 HSPB9Q9BQS6 159 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 ETAA1Q9NY74 926 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 FAM53CQ9NYF3 392 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 KCNIP1Q9NZI2 227 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF107Q9UII5 783 aaPredicted RBP9.4□□□□□ -0.9
CNOT4-211ENST00000498534 ZNF580Q9UK33 172 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 PEX16Q9Y5Y5 336 aa9.4□□□□□ -0.9
CNOT4-211ENST00000498534 IRGMA1A4Y4 181 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms