RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-242	ENST00000498280	FAM210A	Q96ND0	272 aa		0.96	□□□□□ -2.26
RBM39-242	ENST00000498280	TREM1	Q9NP99	234 aa		0.96	□□□□□ -2.26
RBM39-242	ENST00000498280	DMAC2	Q9NW81	257 aa		0.96	□□□□□ -2.26
RBM39-242	ENST00000498280	VPREB3	Q9UKI3	123 aa		0.96	□□□□□ -2.26
RBM39-242	ENST00000498280	ZNF337	Q9Y3M9	751 aa		0.96	□□□□□ -2.26
RBM39-242	ENST00000498280	HSPE1-MOB4	S4R3N1	261 aa		0.96	□□□□□ -2.26
RBM39-242	ENST00000498280	CEP170	Q5SW79	1584 aa		0.96	□□□□□ -2.26
RBM39-242	ENST00000498280	LOC102725191	A0A1B0GVB3	256 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	IGSF23	A1L1A6	192 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280		F5H5T6	163 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	TOR1A	O14656	332 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	TP53I11	O14683	189 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	YKT6	O15498	198 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	MPZL2	O60487	215 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	CRTAP	O75718	401 aa	Predicted RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	ATF1	P18846	271 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	CSRP1	P21291	193 aa	Known RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	SULT1A2	P50226	295 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	GABARAPL2	P60520	117 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	BSPH1	Q075Z2	132 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	PDGFRL	Q15198	375 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	ZNF322	Q6U7Q0	402 aa	Predicted RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	SPNS3	Q6ZMD2	512 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	C2orf73	Q8N5S3	287 aa	Predicted RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	OR8K1	Q8NGG5	319 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	CD200R1	Q8TD46	325 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	RNASEH2C	Q8TDP1	164 aa	Known RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	DTD1	Q8TEA8	209 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	TMEM56	Q96MV1	263 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	BCL2L14	Q9BZR8	327 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	SLC19A3	Q9BZV2	496 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	LRRC19	Q9H756	370 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	TAS2R9	Q9NYW1	312 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	CHMP5	Q9NZZ3	219 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	FBXL3	Q9UKT7	428 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	WASHC3	Q9Y3C0	194 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	DNMT1	P26358	1616 aa	Known RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	YLPM1	P49750	1951 aa	Known RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	PTPRK	Q15262	1439 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	TRPM3	Q9HCF6	1732 aa	Predicted RBP	0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	KIAA0232	Q92628	1395 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	KMT2E	Q8IZD2	1858 aa		0.95	□□□□□ -2.26
RBM39-242	ENST00000498280	PCNX2	A6NKB5	2137 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	COL18A1	P39060	1754 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280		A8MWP6	167 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	FAM25E	A8MYX2	175 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280		B4DEV8	164 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	RAB36	O95755	333 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	ASS1	P00966	412 aa	Known RBP	0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	CRYGD	P07320	174 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	RD3L	P0DJH9	198 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	CTSE	P14091	401 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	PSMA1	P25786	263 aa	Known RBP	0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	RCVRN	P35243	200 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	KRTAP12-1	P59990	96 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	XRCC4	Q13426	336 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	PAFAH1B3	Q15102	231 aa	Known RBP	0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	SYCP1	Q15431	976 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	TMEM249	Q2WGJ8	235 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	FAM229B	Q4G0N7	80 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	SPIN4	Q56A73	249 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	CENPW	Q5EE01	88 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	HENMT1	Q5T8I9	393 aa	Known RBP	0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	VN1R4	Q7Z5H5	301 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	DOLPP1	Q86YN1	238 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	BOD1L2	Q8IYS8	172 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	ZFAND2A	Q8N6M9	145 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	YIPF7	Q8N8F6	280 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	DNAAF3	Q8N9W5	541 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	OR4P4	Q8NGL7	312 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	OR4K13	Q8NH42	304 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	GTF2H4	Q92759	462 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	GALM	Q96C23	342 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	HBEGF	Q99075	208 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	CHST5	Q9GZS9	411 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	AICDA	Q9GZX7	198 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	C11orf49	Q9H6J7	331 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	TUBA4B	Q9H853	241 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	MS4A12	Q9NXJ0	267 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	COMMD9	Q9P000	198 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	MTCH2	Q9Y6C9	303 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	DOCK6	Q96HP0	2047 aa		0.94	□□□□□ -2.26
RBM39-242	ENST00000498280	LCT	P09848	1927 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	CACNA1S	Q13698	1873 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	TRGV4	A0A0C4DH28	118 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	SMLR1	H3BR10	107 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	CPM	P14384	443 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	GADD45A	P24522	165 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	PPP1CC	P36873	323 aa	Known RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	RAB8A	P61006	207 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	FAM3A	P98173	230 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	HTR4	Q13639	388 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	ANGPT1	Q15389	498 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	USF2	Q15853	346 aa	Predicted RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	TRMT12	Q53H54	448 aa	Known RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	RBM48	Q5RL73	367 aa	Known RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	TTC33	Q6PID6	262 aa	Predicted RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	SDIM1	Q6ZPB5	146 aa		0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	MTERF4	Q7Z6M4	381 aa	Known RBP	0.93	□□□□□ -2.26
RBM39-242	ENST00000498280	ZBTB8OS	Q8IWT0	167 aa		0.93	□□□□□ -2.26

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