RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TIPINQ9BVW5 301 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 BCL2L14Q9BZR8 327 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 ARL6Q9H0F7 186 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 PCBD2Q9H0N5 130 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 DAZ1Q9NQZ3 744 aaKnown RBP2.35□□□□□ -2.03
VPS36-206ENST00000497149 ARMC1Q9NVT9 282 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 NLE1Q9NVX2 485 aaPredicted RBP2.35□□□□□ -2.03
VPS36-206ENST00000497149 FBXO5Q9UKT4 447 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 EIF3AQ14152 1382 aaKnown RBP2.35□□□□□ -2.03
VPS36-206ENST00000497149 IGKV2-24A0A0C4DH68 120 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 ANKRD20A5PA0PJZ0 165 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 TVP23AA6NH52 213 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 DISC1C4P0D8 188 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 ZNF593O00488 134 aaPredicted RBP2.34□□□□□ -2.03
VPS36-206ENST00000497149 NDUFS5O43920 106 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 CST8O60676 142 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 IGHV1-46P01743 117 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 PAX6P26367 422 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 TMEM33P57088 247 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 PRKCDQ05655 676 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 TNFRSF9Q07011 255 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 MLLT11Q13015 90 aaPredicted RBP2.34□□□□□ -2.03
VPS36-206ENST00000497149 ZNF235Q14590 738 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 TAF1AQ15573 450 aaPredicted RBP2.34□□□□□ -2.03
VPS36-206ENST00000497149 TOMM34Q15785 309 aaPredicted RBP2.34□□□□□ -2.03
VPS36-206ENST00000497149 SPIN4Q56A73 249 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 FAM104BQ5XKR9 115 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 EPGNQ6UW88 154 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 NIT1Q86X76 327 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 TMEM25Q86YD3 366 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 OR4K2Q8NGD2 314 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 OR11L1Q8NGX0 322 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 ZNF420Q8TAQ5 688 aaPredicted RBP2.34□□□□□ -2.03
VPS36-206ENST00000497149 ZFAND1Q8TCF1 268 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 C16orf78Q8WTQ4 265 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 SMIM19Q96E16 107 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 KCTD7Q96MP8 289 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 QKIQ96PU8 341 aaKnown RBP eCLIP2.34□□□□□ -2.03
VPS36-206ENST00000497149 DERL3Q96Q80 235 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 RBP7Q96R05 134 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 HBEGFQ99075 208 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 CHRNA10Q9GZZ6 450 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 BOLA2Q9H3K6 86 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 RHOFQ9HBH0 211 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 TAS2R1Q9NYW7 299 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 SNX10Q9Y5X0 201 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 NACADO15069 1562 aa2.34□□□□□ -2.03
VPS36-206ENST00000497149 SHANK1Q9Y566 2161 aa2.34□□□□□ -2.04
VPS36-206ENST00000497149 SVILO95425 2214 aa2.34□□□□□ -2.04
VPS36-206ENST00000497149 THADAQ6YHU6 1953 aa2.34□□□□□ -2.04
VPS36-206ENST00000497149 ABCC11Q96J66 1382 aa2.34□□□□□ -2.04
VPS36-206ENST00000497149 SCRIBQ14160 1630 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 A0A1B0GX12 115 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 TSTD3H0UI37 97 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 K7EN84 100 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 CRXO43186 299 aaPredicted RBP2.33□□□□□ -2.04
VPS36-206ENST00000497149 FGF16O43320 207 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 ENTPD6O75354 484 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 FSTL3O95633 263 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 APOC1P02654 83 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 NBEAP1P0C6P0 100 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 LINC00614P0C842 121 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 LIMS3P0CW19 117 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 LIMS4P0CW20 117 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 SLC2A1P11166 492 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 KCNE1P15382 129 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 COL8A2P25067 703 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 CD34P28906 385 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 RPA3P35244 121 aaPredicted RBP2.33□□□□□ -2.04
VPS36-206ENST00000497149 SRP9P49458 86 aaKnown RBP2.33□□□□□ -2.04
VPS36-206ENST00000497149 RAB25P57735 213 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 WHAMMP3Q1A5X7 153 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 CLEC12BQ2HXU8 276 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 TTC32Q5I0X7 151 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 FAM27D1Q5T7N8 215 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 HBMQ6B0K9 141 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 CD200R1LQ6Q8B3 271 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 BRD3OSQ6XYD6 125 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 CYHR1Q6ZMK1 362 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 STX19Q8N4C7 294 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 OR8G5Q8NG78 346 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 OR2AE1Q8NHA4 323 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 RNASE11Q8TAA1 199 aaKnown RBP2.33□□□□□ -2.04
VPS36-206ENST00000497149 ORAOV1Q8WV07 137 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 ZHX1-C8orf76Q96EF9 292 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 TVP23CQ96ET8 276 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 IMP4Q96G21 291 aaKnown RBP2.33□□□□□ -2.04
VPS36-206ENST00000497149 SFRP2Q96HF1 295 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 BTF3L4Q96K17 158 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 OLFM3Q96PB7 478 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 OR2V2Q96R30 315 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 ZNF649Q9BS31 505 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 ALX4Q9H161 411 aaPredicted RBP2.33□□□□□ -2.04
VPS36-206ENST00000497149 C11orf49Q9H6J7 331 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 SND1-IT1Q9HBX3 110 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 IFT46Q9NQC8 304 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 SMPXQ9UHP9 88 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 ZNF391Q9UJN7 358 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 SNX24Q9Y343 169 aa2.33□□□□□ -2.04
VPS36-206ENST00000497149 NID2Q14112 1375 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms