RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 VTCN1Q7Z7D3 282 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 LINC01551Q86U37 167 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 H1FOOQ8IZA3 346 aaPredicted RBP2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 HS3ST5Q8IZT8 346 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 KIR2DL5AQ8N109 375 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 KDM8Q8N371 416 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 FAM71E2Q8N5Q1 922 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 OR8G5Q8NG78 346 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 OR4D6Q8NGJ1 314 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 OR5D16Q8NGK9 328 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 OR5L1Q8NGL2 311 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 OR5AK2Q8NH90 309 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 HAVCR2Q8TDQ0 301 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 ASB17Q8WXJ9 295 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 TMEM234Q8WY98 164 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 C11orf40Q8WZ69 217 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 GHSRQ92847 366 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 MCHR2Q969V1 340 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 TMEM106AQ96A25 262 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 S100A16Q96FQ6 103 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SLC35E1Q96K37 410 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SAMD8Q96LT4 415 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 PANX1Q96RD7 426 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 LYSMD1Q96S90 227 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 COPS8Q99627 209 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 DOHHQ9BU89 302 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SLC17A9Q9BYT1 436 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 OR2J1Q9GZK6 312 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SLC25A31Q9H0C2 315 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 POLR3FQ9H1D9 316 aaPredicted RBP2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SLC35B3Q9H1N7 401 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 HRASLSQ9HDD0 168 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 ZNF302Q9NR11 478 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 DAZ3Q9NR90 486 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SLC2A9Q9NRM0 540 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 BET1LQ9NYM9 111 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 COPS7AQ9UBW8 275 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 NPIPA1Q9UND3 350 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 PIN4Q9Y237 131 aaKnown RBP2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 ASF1AQ9Y294 204 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SNX10Q9Y5X0 201 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 RGPD2P0DJD1 1756 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 SIGLEC1Q9BZZ2 1709 aa2.53□□□□□ -2
RAB3GAP1-206ENST00000497080 MICAL3Q7RTP6 2002 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 ARHGAP21Q5T5U3 1957 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 A0A1W2PPE3 182 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 ANKRD20A5PA0PJZ0 165 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 ZNF320A2RRD8 509 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 TMEM235A6NFC5 223 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 OR5H14A6NHG9 310 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 DHRS7CA6NNS2 312 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 IDSB3KWA1 339 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 SUPT3HB4E1H0 165 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 UMAD1C9J7I0 102 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 SULT2B1O00204 365 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HAS3O00219 553 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 RFXANKO14593 260 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 CXCL11O14625 94 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HIST1H2BKO60814 126 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 TBL1XO60907 577 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 MTX2O75431 263 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 CTAG2O75638 210 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 TNFSF13O75888 250 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 MT-CO2P00403 227 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 MT-ND4P03905 459 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 CD74P04233 296 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 GAPDHP04406 335 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 IFNW1P05000 195 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HLA-DQB2P05538 268 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HIST1H2BJP06899 126 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 MMP7P09237 267 aaPredicted RBP2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 AKAIN1P0CW23 69 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 CALCBP10092 127 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 GZMBP10144 247 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 TDGF1P13385 188 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 ADCYAP1P18509 176 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 ATF1P18846 271 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HIST1H2BOP23527 126 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 NFYBP25208 207 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 CD34P28906 385 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 CMPK1P30085 196 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 BRS3P32247 399 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HIST1H2BBP33778 126 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 AKR1C3P42330 323 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 GABRA2P47869 451 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 RPL29P47914 159 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 CX3CR1P49238 355 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 SULT1A2P50226 295 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 POLR2HP52434 150 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HIST1H2BDP58876 126 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 UBE2MP61081 183 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 UBE2KP61086 200 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 MAXP61244 160 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 RPL23AP62750 156 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 HIST1H2BCP62807 126 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 RPS25P62851 125 aaKnown RBP2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 PAFAH1B2P68402 229 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 SLC35A1P78382 337 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 RAB31Q13636 194 aa2.52□□□□□ -2.01
RAB3GAP1-206ENST00000497080 PDE7AQ13946 482 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms