RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 MYPOPQ86VE0 399 aaPredicted RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 GPR26Q8NDV2 337 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 OR51S1Q8NGJ8 323 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 ZFP90Q8TF47 636 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 C16orf78Q8WTQ4 265 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 PYDC1Q8WXC3 89 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 FAM3DQ96BQ1 224 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 LRRC58Q96CX6 371 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 GMPPAQ96IJ6 420 aaPredicted RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 BTN2A3PQ96KV6 586 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 RDH12Q96NR8 316 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 SULT4A1Q9BR01 284 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 TAPBPLQ9BX59 468 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 ZBP1Q9H171 429 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 DEFB127Q9H1M4 99 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 RHOFQ9HBH0 211 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 EXOSC4Q9NPD3 245 aaKnown RBP2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 SMPXQ9UHP9 88 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 PSG11Q9UQ72 335 aa2.76□□□□□ -1.97
EXOSC3-208ENST00000496910 LAMA4Q16363 1823 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 RBFOX3A6NFN3 312 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 CLDN24A6NM45 220 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 EVPLLA8MZ36 301 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 DISC1C4P0D8 188 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 MFNGO00587 321 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 XKRYO14609 159 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 EDIL3O43854 480 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 UPK1BO75841 260 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 HMGN1P05114 100 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 GKN3PP0CG01 181 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 KCNE1P15382 129 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 RCC1P18754 421 aaPredicted RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 WARSP23381 471 aaKnown RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 F2RP25116 425 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 FMO3P31513 532 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 CD70P32970 193 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 TTPAP49638 278 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 CRYBA4P53673 196 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 MTPNP58546 118 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 RPS23P62266 143 aaKnown RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 CD300CQ08708 224 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 SMAGPQ0VAQ4 97 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 TOMM34Q15785 309 aaPredicted RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 LRRC36Q1X8D7 754 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 CHRFAM7AQ494W8 412 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 ZCWPW2Q504Y3 356 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF506Q5JVG8 444 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 STEAP4Q687X5 459 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 KDM4DQ6B0I6 523 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 RFLNAQ6ZTI6 216 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 LINC00173Q6ZV60 143 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 FAM220AQ7Z4H9 259 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 COMMD7Q86VX2 200 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 NIT1Q86X76 327 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 STK40Q8N2I9 435 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 FAM71E2Q8N5Q1 922 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 CLDN22Q8N7P3 220 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 NKAPP1Q8N9T2 125 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 OR52E4Q8NGH9 312 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 OR6T1Q8NGN1 323 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 NEIL3Q8TAT5 605 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 SLC37A2Q8TED4 501 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 BLNKQ8WV28 456 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 SRSF12Q8WXF0 261 aaKnown RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 ASB13Q8WXK3 278 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 RGP1Q92546 391 aaPredicted RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 RERGQ96A58 199 aaPredicted RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 BIRC8Q96P09 236 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 PECRQ9BY49 303 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 GABARAPL3Q9BY60 117 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 OR51I1Q9H343 314 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 VSIRQ9H7M9 311 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 DIABLOQ9NR28 239 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 BATF3Q9NR55 127 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 HEBP1Q9NRV9 189 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 COMMD9Q9P000 198 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF391Q9UJN7 358 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 KLHL21Q9UJP4 597 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 FBXO5Q9UKT4 447 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 RAB22AQ9UL26 194 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 SNX10Q9Y5X0 201 aa2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 ANK3Q12955 4377 aaKnown RBP2.75□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF532Q9HCE3 1301 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 PLXNB1O43157 2135 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 PDCD11Q14690 1871 aaKnown RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 TRAV9-2A0A087WT02 112 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 IGHV3OR16-9A0A0B4J2B5 98 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 BTNL10A8MVZ5 291 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 ZNF780AO75290 641 aaPredicted RBP2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 SOX14O95416 240 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 THY1P04216 161 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 CST2P09228 141 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 CSF3P09919 207 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 AKR1C4P17516 323 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 TCN2P20062 427 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 M6PRP20645 277 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 HTR1EP28566 365 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 ADORA1P30542 326 aa2.74□□□□□ -1.97
EXOSC3-208ENST00000496910 CHRNB4P30926 498 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms