RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 IGHV4-59P01825 116 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 FBP1P09467 338 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 GNG10P50151 68 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 CROCCP3Q8IVE0 287 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 OR4P4Q8NGL7 312 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 JMJD8Q96S16 334 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 CMSS1Q9BQ75 279 aaKnown RBP15.76■□□□□ 0.11
HDAC4-212ENST00000495497 DCSTAMPQ9H295 470 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 KCNIP1Q9NZI2 227 aa15.76■□□□□ 0.11
HDAC4-212ENST00000495497 A0A087X0M5 115 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 A0A1B0GX30 115 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 A0A1W2PPE3 182 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 SDCBPO00560 298 aaPredicted RBP15.75■□□□□ 0.11
HDAC4-212ENST00000495497 MFNGO00587 321 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 TOR1AO14656 332 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 SPINT2O43291 252 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 HIST1H1DP16402 221 aaKnown RBP15.75■□□□□ 0.11
HDAC4-212ENST00000495497 CD34P28906 385 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 UBA52P62987 128 aaKnown RBP15.75■□□□□ 0.11
HDAC4-212ENST00000495497 FAM189A2Q15884 450 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 KRTAP24-1Q3LI83 254 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 CDNFQ49AH0 187 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 PLA1AQ53H76 456 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 ZNF880Q6PDB4 577 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 OR10A7Q8NGE5 316 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 ABRACLQ9P1F3 81 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 SPATA2Q9UM82 520 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 PSG11Q9UQ72 335 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 TBL2Q9Y4P3 447 aaKnown RBP15.75■□□□□ 0.11
HDAC4-212ENST00000495497 ETV7Q9Y603 341 aa15.75■□□□□ 0.11
HDAC4-212ENST00000495497 F2RL2O00254 374 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 IGLV1-47P01700 117 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 IER3P46695 156 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 SCAND1P57086 179 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 LOXL3P58215 753 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 SPCS2Q15005 226 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 SSX2Q16385 188 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 TRAT1Q6PIZ9 186 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 LDLRAD3Q86YD5 345 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 IZUMO1Q8IYV9 350 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 DTX3Q8N9I9 347 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 BEND2Q8NDZ0 799 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 OR52L2PQ8NGH6 319 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 OR10V1Q8NGI7 309 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 GFOD1Q9NXC2 390 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 HILPDAQ9Y5L2 63 aa15.74■□□□□ 0.11
HDAC4-212ENST00000495497 FBN1P35555 2871 aaKnown RBP15.73■□□□□ 0.11
HDAC4-212ENST00000495497 TRBV6-6A0A0A6YYG2 114 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 J3QR06 171 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 CD3GP09693 182 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 HMGN3Q15651 99 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 HLA-DRB5Q30154 266 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 OR9G1Q8NH87 305 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 ZNF596Q8TC21 504 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 MDFIQ99750 246 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 MEGF9Q9H1U4 602 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 RIMS4Q9H426 269 aaPredicted RBP15.73■□□□□ 0.11
HDAC4-212ENST00000495497 Q9N2K0 584 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 C12orf4Q9NQ89 552 aa15.73■□□□□ 0.11
HDAC4-212ENST00000495497 TRIM77I1YAP6 450 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 TMEM127O75204 238 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 HTR1DP28221 377 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 RORCP51449 518 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 PRRX1P54821 245 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 GNMTQ14749 295 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-212ENST00000495497 SAMD12Q8N8I0 201 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 OR52M1Q8NGK5 317 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 SSMEM1Q8WWF3 244 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 MAFIPQ8WZ33 124 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 TAF15Q92804 592 aaKnown RBP eCLIP15.72■□□□□ 0.11
HDAC4-212ENST00000495497 MALSU1Q96EH3 234 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 SSX3Q99909 188 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 CHIAQ9BZP6 476 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 MMP28Q9H239 520 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 COMMD3Q9UBI1 195 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 GNG12Q9UBI6 72 aa15.72■□□□□ 0.11
HDAC4-212ENST00000495497 ZNF230Q9UIE0 474 aaPredicted RBP15.72■□□□□ 0.11
HDAC4-212ENST00000495497 TRAV18A0A075B6X5 111 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 BUB1B-PAK6H3BSN5 160 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 SLC31A2O15432 143 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 RAB13P51153 203 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 TMBIM6P55061 237 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 MRPS15P82914 257 aaKnown RBP15.71■□□□□ 0.11
HDAC4-212ENST00000495497 ARFRP1Q13795 201 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 KRTAP21-3Q3LHN1 58 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 ZNF260Q3ZCT1 412 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 MINOS1Q5TGZ0 78 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 RAB2BQ8WUD1 216 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 RAB9BQ9NP90 201 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 OR2S2Q9NQN1 319 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 DPM3Q9P2X0 92 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 MINOS1-NBL1R4GNA1 71 aa15.71■□□□□ 0.11
HDAC4-212ENST00000495497 TMEM235A6NFC5 223 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 RNF212BA8MTL3 300 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 SERPINE3A8MV23 424 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 H3BUX3 64 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 RNASE1P07998 156 aaKnown RBP15.7■□□□□ 0.1
HDAC4-212ENST00000495497 FCGR3AP08637 254 aa15.7■□□□□ 0.1
HDAC4-212ENST00000495497 SCTP09683 121 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms