RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 YTHDF1Q9BYJ9 559 aaKnown RBP14.17□□□□□ -0.14
HDAC4-211ENST00000494800 SIGLEC9Q9Y336 463 aa14.17□□□□□ -0.14
HDAC4-211ENST00000494800 C15orf65H3BRN8 121 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 SLC17A2O00624 439 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 PDCD5O14737 125 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 LPLP06858 475 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 VSIG10L2P0DP72 767 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 KRTAP10-3P60369 221 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 FABP5Q01469 135 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 EMX1Q04741 257 aaPredicted RBP14.16□□□□□ -0.14
HDAC4-211ENST00000494800 RAB11BQ15907 218 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 OR10K2Q6IF99 312 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 ZNF554Q86TJ5 538 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 OR8H3Q8N146 312 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 GAPTQ8N292 157 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 Q8N2B8 174 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 PRR18Q8N4B5 295 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 KLHDC1Q8N7A1 406 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 C8orf31Q8N9H6 132 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 ZNF702PQ9H963 129 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 GFOD1Q9NXC2 390 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 GNG12Q9UBI6 72 aa14.16□□□□□ -0.14
HDAC4-211ENST00000494800 AK6Q9Y3D8 172 aaKnown RBP14.16□□□□□ -0.14
HDAC4-211ENST00000494800 C12orf77C9JDV5 145 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 M0QZK8 103 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 OR2F2O95006 317 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 CD37P11049 281 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 CD24P25063 80 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 C2orf68Q2NKX9 166 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 SIGIRRQ6IA17 410 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 OR2W3Q7Z3T1 314 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 FCGR1BQ92637 280 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 OCSTAMPQ9BR26 566 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 SLC25A33Q9BSK2 321 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 TM2D1Q9BX74 207 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 NDUFB11Q9NX14 153 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 LRRC42Q9Y546 428 aa14.15□□□□□ -0.14
HDAC4-211ENST00000494800 TMEM14DPA8MWL7 114 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 CCRL2O00421 344 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 HSD17B6O14756 317 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 HBZP02008 142 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 GAPDHP04406 335 aaKnown RBP14.14□□□□□ -0.15
HDAC4-211ENST00000494800 MYL9P24844 172 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 CHATP28329 748 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 VDAC2P45880 294 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-211ENST00000494800 P2RY14Q15391 338 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 UTF1Q5T230 341 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 THNSL2Q86YJ6 484 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 LINC00311Q8N616 119 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 UBALD1Q8TB05 177 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 RBM14Q96PK6 669 aaKnown RBP14.14□□□□□ -0.15
HDAC4-211ENST00000494800 MMP27Q9H306 513 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 TAF9BQ9HBM6 251 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 CHMP1AQ9HD42 196 aaPredicted RBP14.14□□□□□ -0.15
HDAC4-211ENST00000494800 PLEKHJ1Q9NW61 149 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 ABRACLQ9P1F3 81 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 V9GY05 133 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 KIAA2026Q5HYC2 2103 aa14.14□□□□□ -0.15
HDAC4-211ENST00000494800 IGHV3-43A0A0B4J1X8 118 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 A0A1W2PPE3 182 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 IGHV3-43DP0DP04 118 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 RCC1P18754 421 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-211ENST00000494800 GALP22466 123 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 BLVRBP30043 206 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-211ENST00000494800 LOXL3P58215 753 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 BLCAPP62952 87 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 UNC119Q13432 240 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 HES1Q14469 280 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 HABP2Q14520 560 aaPredicted RBP14.13□□□□□ -0.15
HDAC4-211ENST00000494800 OR56B4Q8NH76 319 aa14.13□□□□□ -0.15
HDAC4-211ENST00000494800 MBNL3Q9NUK0 354 aaKnown RBP14.13□□□□□ -0.15
HDAC4-211ENST00000494800 RRP15Q9Y3B9 282 aaKnown RBP14.13□□□□□ -0.15
HDAC4-211ENST00000494800 TRAV1-2A0A0B4J238 106 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 TXNL1O43396 289 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 RGS11O94810 467 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 PSMB9P28065 219 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 QRFPP83859 136 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 ZNF816Q0VGE8 651 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-211ENST00000494800 SSX1Q16384 188 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 UBE2UQ5VVX9 321 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 C6orf201Q7Z4U5 140 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 SPARTQ8N0X7 666 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 DRAM1Q8N682 238 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 OR1L1Q8NH94 360 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 MRPL30Q8TCC3 161 aaKnown RBP14.12□□□□□ -0.15
HDAC4-211ENST00000494800 GALMQ96C23 342 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 SULT4A1Q9BR01 284 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 NICN1Q9BSH3 213 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 FAAP24Q9BTP7 215 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 RIMS4Q9H426 269 aaPredicted RBP14.12□□□□□ -0.15
HDAC4-211ENST00000494800 OR2S2Q9NQN1 319 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 SERTAD4Q9NUC0 356 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 MOB4Q9Y3A3 225 aa14.12□□□□□ -0.15
HDAC4-211ENST00000494800 TRDV1A0A1B0GX56 115 aa14.11□□□□□ -0.15
HDAC4-211ENST00000494800 A0A1W2PPI3 338 aa14.11□□□□□ -0.15
HDAC4-211ENST00000494800 SNRNP70P08621 437 aaKnown RBP14.11□□□□□ -0.15
HDAC4-211ENST00000494800 CSF1P09603 554 aa14.11□□□□□ -0.15
HDAC4-211ENST00000494800 TMEM11P17152 192 aa14.11□□□□□ -0.15
HDAC4-211ENST00000494800 STEAP3Q658P3 488 aa14.11□□□□□ -0.15
HDAC4-211ENST00000494800 CD200R1LQ6Q8B3 271 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms