RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 C12orf77C9JDV5 145 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 SNRNP70P08621 437 aaKnown RBP26.51■■□□□ 1.83
CBX4-203ENST00000494546 UCHL1P09936 223 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 UBBP0CG47 229 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 RAB7AP51149 207 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 NSUN5P1Q3KNT7 163 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 OR10K2Q6IF99 312 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 FAM53AQ6NSI3 398 aaPredicted RBP26.51■■□□□ 1.83
CBX4-203ENST00000494546 CYYR1Q96J86 154 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 GFOD1Q9NXC2 390 aa26.51■■□□□ 1.83
CBX4-203ENST00000494546 SH2D7A6NKC9 451 aaPredicted RBP26.5■■□□□ 1.83
CBX4-203ENST00000494546 LOXL3P58215 753 aa26.5■■□□□ 1.83
CBX4-203ENST00000494546 RPS25P62851 125 aaKnown RBP26.5■■□□□ 1.83
CBX4-203ENST00000494546 TPBGQ13641 420 aa26.5■■□□□ 1.83
CBX4-203ENST00000494546 HES1Q14469 280 aa26.5■■□□□ 1.83
CBX4-203ENST00000494546 C6orf183Q5T699 404 aa26.5■■□□□ 1.83
CBX4-203ENST00000494546 PRSS48Q7RTY5 328 aa26.5■■□□□ 1.83
CBX4-203ENST00000494546 THNSL2Q86YJ6 484 aa26.5■■□□□ 1.83
CBX4-203ENST00000494546 PRR18Q8N4B5 295 aa26.5■■□□□ 1.83
CBX4-203ENST00000494546 WIPF2Q8TF74 440 aaPredicted RBP26.5■■□□□ 1.83
CBX4-203ENST00000494546 FAM90A9PA6NNJ1 464 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 SPINT2O43291 252 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 PDCD6O75340 191 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 GLAP06280 429 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 LPLP06858 475 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 MAP2K4P45985 399 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 NKAPLQ5M9Q1 402 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 C1orf100Q5SVJ3 147 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 OR8H3Q8N146 312 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 RAB9BQ9NP90 201 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 ISYNA1Q9NPH2 558 aa26.49■■□□□ 1.83
CBX4-203ENST00000494546 HSD17B6O14756 317 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 CA11O75493 328 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 AMY1AP04745 511 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 AMY2AP04746 511 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 VSIG8P0DPA2 414 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 C9orf152Q5JTZ5 239 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 GAPTQ8N292 157 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 CITED2Q99967 270 aaPredicted RBP26.48■■□□□ 1.83
CBX4-203ENST00000494546 GNG12Q9UBI6 72 aa26.48■■□□□ 1.83
CBX4-203ENST00000494546 CCRL2O00421 344 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 RCC1P18754 421 aaPredicted RBP26.47■■□□□ 1.83
CBX4-203ENST00000494546 HTR2CP28335 458 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 REG1BP48304 166 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 MLLT11Q13015 90 aaPredicted RBP26.47■■□□□ 1.83
CBX4-203ENST00000494546 HNF4GQ14541 408 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 TMEM91Q6ZNR0 172 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 OR1L1Q8NH94 360 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 KCNK15Q9H427 330 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 MOB4Q9Y3A3 225 aa26.47■■□□□ 1.83
CBX4-203ENST00000494546 M0QZK8 103 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 HBZP02008 142 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 GAPDHP04406 335 aaKnown RBP26.46■■□□□ 1.83
CBX4-203ENST00000494546 TMEM11P17152 192 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 TRAM1Q15629 374 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 TRAT1Q6PIZ9 186 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 MOB3BQ86TA1 216 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 LINC00311Q8N616 119 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 OR10V1Q8NGI7 309 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 NEDD4LQ96PU5 975 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 TMEM59Q9BXS4 323 aa26.46■■□□□ 1.83
CBX4-203ENST00000494546 CPEP16870 476 aa26.45■■□□□ 1.82
CBX4-203ENST00000494546 RPS27AP62979 156 aaKnown RBP26.45■■□□□ 1.82
CBX4-203ENST00000494546 ZNF816Q0VGE8 651 aaPredicted RBP26.45■■□□□ 1.82
CBX4-203ENST00000494546 CENPVQ7Z7K6 275 aaPredicted RBP26.45■■□□□ 1.82
CBX4-203ENST00000494546 NDUFA11Q86Y39 141 aa26.45■■□□□ 1.82
CBX4-203ENST00000494546 C8orf31Q8N9H6 132 aa26.45■■□□□ 1.82
CBX4-203ENST00000494546 OR5AU1Q8NGC0 362 aa26.45■■□□□ 1.82
CBX4-203ENST00000494546 KCNG3Q8TAE7 436 aa26.45■■□□□ 1.82
CBX4-203ENST00000494546 MGLLQ99685 303 aa26.45■■□□□ 1.82
CBX4-203ENST00000494546 CMYA5Q8N3K9 4069 aa26.45■■□□□ 1.82
CBX4-203ENST00000494546 IGHV1-3A0A0C4DH29 117 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 SLC22A1O15245 554 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 IGKV1D-33P01593 117 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 IGKV1-33P01594 117 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 PSMA1P25786 263 aaKnown RBP26.44■■□□□ 1.82
CBX4-203ENST00000494546 IL3RAP26951 378 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 OR6M1Q8NGM8 313 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 MRPL30Q8TCC3 161 aaKnown RBP26.44■■□□□ 1.82
CBX4-203ENST00000494546 TAF9BQ9HBM6 251 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 KCNIP1Q9NZI2 227 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 BLOC1S6Q9UL45 172 aa26.44■■□□□ 1.82
CBX4-203ENST00000494546 SLC31A2O15432 143 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 ATP6V1G2O95670 118 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 CHATP28329 748 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 EMX1Q04741 257 aaPredicted RBP26.43■■□□□ 1.82
CBX4-203ENST00000494546 UNC119Q13432 240 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 TMEM30BQ3MIR4 351 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 Q3ZCU0 254 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 SULT4A1Q9BR01 284 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 RAB26Q9ULW5 256 aa26.43■■□□□ 1.82
CBX4-203ENST00000494546 IGHV3-72A0A0B4J1Y9 119 aa26.42■■□□□ 1.82
CBX4-203ENST00000494546 ARL6IP5O75915 188 aa26.42■■□□□ 1.82
CBX4-203ENST00000494546 CD37P11049 281 aa26.42■■□□□ 1.82
CBX4-203ENST00000494546 C1QL4Q86Z23 238 aa26.42■■□□□ 1.82
CBX4-203ENST00000494546 NICN1Q9BSH3 213 aa26.42■■□□□ 1.82
CBX4-203ENST00000494546 PLGRKTQ9HBL7 147 aa26.42■■□□□ 1.82
CBX4-203ENST00000494546 MBNL3Q9NUK0 354 aaKnown RBP26.42■■□□□ 1.82
CBX4-203ENST00000494546 AK6Q9Y3D8 172 aaKnown RBP26.42■■□□□ 1.82
CBX4-203ENST00000494546 BPNT1O95861 308 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms