RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GPR141Q7Z602 305 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 C5orf24Q7Z6I8 188 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 TMEM86BQ8N661 226 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-208ENST00000494334 OR52M1Q8NGK5 317 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 OR5H6Q8NGV6 325 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 OR9G1Q8NH87 305 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 OR1L1Q8NH94 360 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 ZNF596Q8TC21 504 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 LGALS14Q8TCE9 139 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 SSMEM1Q8WWF3 244 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 LEAP2Q969E1 77 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 RAB3CQ96E17 227 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 HDHD3Q9BSH5 251 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-208ENST00000494334 ATG5Q9H1Y0 275 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 RIMS4Q9H426 269 aaPredicted RBP10.97□□□□□ -0.65
COL1A1-208ENST00000494334 ZMAT3Q9HA38 289 aaKnown RBP10.97□□□□□ -0.65
COL1A1-208ENST00000494334 TAF9BQ9HBM6 251 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 PSG11Q9UQ72 335 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 POMT1Q9Y6A1 747 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 MINOS1-NBL1R4GNA1 71 aa10.97□□□□□ -0.65
COL1A1-208ENST00000494334 TRBV6-6A0A0A6YYG2 114 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 IGHV3-43A0A0B4J1X8 118 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 J3QR06 171 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 SDCBPO00560 298 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-208ENST00000494334 TOR1AO14656 332 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 SPINT2O43291 252 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 TMEM127O75204 238 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 HBZP02008 142 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 IGHV3-43DP0DP04 118 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 HTR1DP28221 377 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 SERPINB10P48595 397 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 PRRX1P54821 245 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 SCAND1P57086 179 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 SSX2Q16385 188 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 CTF1Q16619 201 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 HLA-DRB5Q30154 266 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 OLFML2AQ68BL7 652 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 FAM53AQ6NSI3 398 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-208ENST00000494334 ZNF880Q6PDB4 577 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 C16orf87Q6PH81 154 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 ZNF554Q86TJ5 538 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 CROCCP3Q8IVE0 287 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 PRR18Q8N4B5 295 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 NDNFQ8TB73 568 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 SSX3Q99909 188 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 CMSS1Q9BQ75 279 aaKnown RBP10.96□□□□□ -0.65
COL1A1-208ENST00000494334 C19orf24Q9BVV8 132 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 CHIAQ9BZP6 476 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 DPAGT1Q9H3H5 408 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 CHMP1AQ9HD42 196 aaPredicted RBP10.96□□□□□ -0.65
COL1A1-208ENST00000494334 KCNIP1Q9NZI2 227 aa10.96□□□□□ -0.65
COL1A1-208ENST00000494334 ATRQ13535 2644 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 MFNGO00587 321 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 HIST1H1DP16402 221 aaKnown RBP10.95□□□□□ -0.66
COL1A1-208ENST00000494334 GNB3P16520 340 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 HMGN3Q15651 99 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 SLC25A46Q96AG3 418 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 MMP28Q9H239 520 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 RAB9BQ9NP90 201 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 GFOD1Q9NXC2 390 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 ABRACLQ9P1F3 81 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 DPM3Q9P2X0 92 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 SPATA2Q9UM82 520 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 HILPDAQ9Y5L2 63 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 ETV7Q9Y603 341 aa10.95□□□□□ -0.66
COL1A1-208ENST00000494334 A0A075B6Q4 140 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 A0A1W2PPE3 182 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 VGLL3A8MV65 326 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 LEUTXA8MZ59 168 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 LY6LH3BQJ8 138 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 RPL5P46777 297 aaKnown RBP10.94□□□□□ -0.66
COL1A1-208ENST00000494334 GNG10P50151 68 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 AANATQ16613 207 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 LRRC75BQ2VPJ9 315 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 PLA1AQ53H76 456 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 OR5R1Q8NH85 324 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 SETD6Q8TBK2 473 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 PIFOQ8TCI5 191 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 SLC25A38Q96DW6 304 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 Q9N2K0 584 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 C12orf4Q9NQ89 552 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 RHBDL2Q9NX52 303 aa10.94□□□□□ -0.66
COL1A1-208ENST00000494334 FBN1P35555 2871 aaKnown RBP10.94□□□□□ -0.66
COL1A1-208ENST00000494334 BTBD17A6NE02 478 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 FAM181BA6NEQ2 426 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 SERPINE3A8MV23 424 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 H3BUX3 64 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 SCGNO76038 276 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 CD3GP09693 182 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 RAB13P51153 203 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 ZNF134P52741 427 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 HTD2P86397 168 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 TMEM30BQ3MIR4 351 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 Q3ZCU0 254 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 CDNFQ49AH0 187 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 MOB1BQ7L9L4 216 aa10.93□□□□□ -0.66
COL1A1-208ENST00000494334 LINC00311Q8N616 119 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms