RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 MRPL30Q8TCC3 161 aaKnown RBP11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 SCARB1Q8WTV0 552 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 FXYD6Q9H0Q3 95 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 NARFLQ9H6Q4 476 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 PLEKHF2Q9H8W4 249 aa11.77□□□□□ -0.53
PDZRN3-210ENST00000492909 CENPEQ02224 2701 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 TRBV6-6A0A0A6YYG2 114 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 GYPAP02724 150 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 IFNA6P05013 189 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 CSN2P05814 226 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 RPA2P15927 270 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 COL8A2P25067 703 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 MRPS11P82912 194 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 SRSF4Q08170 494 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 ZMYND11Q15326 602 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 LY6G6FQ5SQ64 297 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 VAX1Q5SQQ9 334 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 Q6ZS49 121 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 TMED4Q7Z7H5 227 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 GAPTQ8N292 157 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 SDSLQ96GA7 329 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 SNX22Q96L94 193 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 SLC6A7Q99884 636 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 PRRT1Q99946 306 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 SHARPINQ9H0F6 387 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 ARL6Q9H0F7 186 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 Q9N2K0 584 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 FBN2P35556 2912 aa11.76□□□□□ -0.53
PDZRN3-210ENST00000492909 TRAV14DV4A0A0A6YYC5 116 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 TMEM30CPA0ZSE6 113 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 LYNX1G3V0Z9 82 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 K7N7A8 449 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 LYNX1P0DP58 116 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 CDKN1AP38936 164 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 SLC35E4Q6ICL7 350 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 LPCAT3Q6P1A2 487 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 GSG1LQ6UXU4 331 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNF788Q6ZQV5 615 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 MOB1BQ7L9L4 216 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 REG4Q9BYZ8 158 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNF665Q9H7R5 613 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 RDH8Q9NYR8 311 aa11.75□□□□□ -0.53
PDZRN3-210ENST00000492909 KIR2DS1A0A191URI9 304 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 NKX6-3A6NJ46 265 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 MGST3O14880 152 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 DAOP14920 347 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 KIR2DS4P43632 304 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 PAX5Q02548 391 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 AESQ08117 197 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 KIR2DS1Q14954 304 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 KIAA2026Q5HYC2 2103 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 ZNF880Q6PDB4 577 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 PEG10Q86TG7 708 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 ARRDC1Q8N5I2 433 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 OR5D13Q8NGL4 314 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 OR5M8Q8NGP6 311 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 CCL13Q99616 98 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 EHFQ9NZC4 300 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 TRAPPC2LQ9UL33 140 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 VSIG4Q9Y279 399 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 FLNBO75369 2602 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 USF3Q68DE3 2245 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 SIGLEC5O15389 551 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 LY6HO94772 140 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 FSTL3O95633 263 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 TK1P04183 234 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 NMBP08949 121 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 RCC1P18754 421 aaPredicted RBP11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 CD34P28906 385 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 IL13RA1P78552 427 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 DHRS2Q13268 280 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 SCGB2B2Q4G0G5 96 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 KRBOX4Q5JUW0 171 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 OVCH2Q7RTZ1 564 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 SLC25A42Q86VD7 318 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 TMEM17Q86X19 198 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 COQ2Q96H96 371 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 MFFQ9GZY8 342 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 NECAP2Q9NVZ3 263 aa11.74□□□□□ -0.53
PDZRN3-210ENST00000492909 AKAP6Q13023 2319 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 MFSD2BA6NFX1 497 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 TRDCB7Z8K6 153 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 OVOL3O00110 214 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 SDCBPO00560 298 aaPredicted RBP11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 TMPRSS2O15393 492 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 NDUFA2O43678 99 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 ZBTB25P24278 435 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 KRTAP10-9P60411 292 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 FGL1Q08830 312 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 BAMBIQ13145 260 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 EDDM3AQ14507 147 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 TMEM65Q6PI78 240 aa11.73□□□□□ -0.53
PDZRN3-210ENST00000492909 SLC51BQ86UW2 128 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms