RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 GFOD1Q9NXC2 390 aa12.17□□□□□ -0.46
COL27A1-206ENST00000490831 A0A1W2PPI3 338 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 ARL6IP5O75915 188 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 BPNT1O95861 308 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 MPIG6BO95866 241 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 IGHV3-7P01780 117 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 CD24P25063 80 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 CHATP28329 748 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 RAB7AP51149 207 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 GABARAPL2P60520 117 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 UNC119Q13432 240 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 HABP2Q14520 560 aaPredicted RBP12.16□□□□□ -0.46
COL27A1-206ENST00000490831 LTC4SQ16873 150 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 C6orf183Q5T699 404 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 SYT6Q5T7P8 510 aaPredicted RBP12.16□□□□□ -0.46
COL27A1-206ENST00000490831 Q6ZS46 218 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 Q6ZTK2 550 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 OR8H3Q8N146 312 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 FAM46BQ96A09 425 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 TMEM59Q9BXS4 323 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 RAB9BQ9NP90 201 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 ACOT13Q9NPJ3 140 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 TRAPPC2LQ9UL33 140 aa12.16□□□□□ -0.46
COL27A1-206ENST00000490831 SDCBPO00560 298 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-206ENST00000490831 SLC17A2O00624 439 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 DENRO43583 198 aaKnown RBP12.15□□□□□ -0.46
COL27A1-206ENST00000490831 AMY1AP04745 511 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 AMY2AP04746 511 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 GNG10P50151 68 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 FABP5Q01469 135 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 ZNF816Q0VGE8 651 aaPredicted RBP12.15□□□□□ -0.46
COL27A1-206ENST00000490831 SSX1Q16384 188 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 C2orf68Q2NKX9 166 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 OR10K2Q6IF99 312 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 ZNF439Q8NDP4 499 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 OR4K15Q8NH41 348 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 MRPL30Q8TCC3 161 aaKnown RBP12.15□□□□□ -0.46
COL27A1-206ENST00000490831 CYYR1Q96J86 154 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 OCSTAMPQ9BR26 566 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 SLC25A33Q9BSK2 321 aa12.15□□□□□ -0.46
COL27A1-206ENST00000490831 MEGF8Q7Z7M0 2845 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 UBE2QL1A1L167 161 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 M0QZK8 103 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 SPINT2O43291 252 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 HBZP02008 142 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 FAM106CPP0CH98 169 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 RCC1P18754 421 aaPredicted RBP12.14□□□□□ -0.47
COL27A1-206ENST00000490831 ZNF137PP52743 207 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 EMX1Q04741 257 aaPredicted RBP12.14□□□□□ -0.47
COL27A1-206ENST00000490831 DIAPH2-AS1Q14236 149 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 CD200R1LQ6Q8B3 271 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 OR2W3Q7Z3T1 314 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 OR10X1Q8NGY0 326 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 UBALD1Q8TB05 177 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 ST6GALNAC6Q969X2 333 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 NEDD4LQ96PU5 975 aa12.14□□□□□ -0.47
COL27A1-206ENST00000490831 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
COL27A1-206ENST00000490831 A0A1W2PPE3 182 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 HSD17B6O14756 317 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 TSPAN15O95858 294 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 EBI3Q14213 229 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 FAM53AQ6NSI3 398 aaPredicted RBP12.13□□□□□ -0.47
COL27A1-206ENST00000490831 SLC25A48Q6ZT89 311 aaKnown RBP12.13□□□□□ -0.47
COL27A1-206ENST00000490831 FAM89BQ8N5H3 189 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 DRAM1Q8N682 238 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 OR56B4Q8NH76 319 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 CAPSLQ8WWF8 208 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 SULT4A1Q9BR01 284 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 YTHDF1Q9BYJ9 559 aaKnown RBP12.13□□□□□ -0.47
COL27A1-206ENST00000490831 KCNK15Q9H427 330 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 Q9H521 79 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 TAF9BQ9HBM6 251 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 NDUFB11Q9NX14 153 aa12.13□□□□□ -0.47
COL27A1-206ENST00000490831 AK6Q9Y3D8 172 aaKnown RBP12.13□□□□□ -0.47
COL27A1-206ENST00000490831 A0A0A6YYD4 124 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 IGHV3-43A0A0B4J1X8 118 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 NAPSAO96009 420 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 GAPDHP04406 335 aaKnown RBP12.12□□□□□ -0.47
COL27A1-206ENST00000490831 SNRNP70P08621 437 aaKnown RBP12.12□□□□□ -0.47
COL27A1-206ENST00000490831 IGHV3-43DP0DP04 118 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 ARSBP15848 533 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 GALP22466 123 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 CALRP27797 417 aaKnown RBP12.12□□□□□ -0.47
COL27A1-206ENST00000490831 RANBP1P43487 201 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 VDAC2P45880 294 aaPredicted RBP12.12□□□□□ -0.47
COL27A1-206ENST00000490831 PSMD7P51665 324 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 LY6G6FQ5SQ64 297 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 UBE2UQ5VVX9 321 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 ZNF880Q6PDB4 577 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 NICN1Q9BSH3 213 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 LPAR5Q9H1C0 372 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 PLGRKTQ9HBL7 147 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 MOB4Q9Y3A3 225 aa12.12□□□□□ -0.47
COL27A1-206ENST00000490831 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
COL27A1-206ENST00000490831 FOXI3A8MTJ6 420 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms