RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ATP6V1FQ16864 119 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 CYHR1Q6ZMK1 362 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF705AQ6ZN79 300 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 OAFQ86UD1 273 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 GPD1LQ8N335 351 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 C11orf42Q8N5U0 333 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 STXBP6Q8NFX7 210 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PACRGQ96M98 296 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SOSTQ9BQB4 213 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 NRIP2Q9BQI9 281 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PCBD2Q9H0N5 130 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PXMP2Q9NR77 195 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MMP26Q9NRE1 261 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RBM22Q9NW64 420 aaKnown RBP eCLIP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 DOK5Q9P104 306 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 DNAJC15Q9Y5T4 150 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MYO16Q9Y6X6 1858 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 IGKV6-21A0A0C4DH24 114 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 A0A0G2JN53 185 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 IRGMA1A4Y4 181 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SNRPGP15A8MWD9 76 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 E7EQ34 232 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 G3V3Q6 166 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SMKR1H3BMG3 65 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 M0R129 80 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 GOSR2O14653 212 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 BCL2L11O43521 198 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SNAI2O43623 268 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 CA11O75493 328 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SEMG1P04279 462 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 FCGR3AP08637 254 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 UCHL1P09936 223 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SFTA3P0C7M3 94 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ELK1P19419 428 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SHC1P29353 583 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RPL29P47914 159 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF140P52738 457 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 KLF3P57682 345 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RAP1BP61224 184 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RPS25P62851 125 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 RPL19P84098 196 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 SLC10A7Q0GE19 358 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 OR2F1Q13607 317 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 KHDC3LQ587J8 217 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MESTQ5EB52 335 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM91Q6ZNR0 172 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 HIST2H3AQ71DI3 136 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 Q71RC1 249 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 S100A7AQ86SG5 101 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MRPL52Q86TS9 123 aaKnown RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF546Q86UE3 836 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 CA13Q8N1Q1 262 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 FAM24BQ8N5W8 94 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 OR10AD1Q8NGE0 317 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 OR10R2Q8NGX6 335 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 OR8U1Q8NH10 309 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TFGQ92734 400 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ISOC2Q96AB3 205 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MALSU1Q96EH3 234 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 GMPPAQ96IJ6 420 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 PGLYRP2Q96PD5 576 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ATF6BQ99941 703 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TUBA4BQ9H853 241 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF430Q9H8G1 570 aaPredicted RBP2.24□□□□□ -2.05
UBXN4-208ENST00000490163 TPT1P8Q9HAU6 139 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 NOX3Q9HBY0 568 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 CBLN4Q9NTU7 201 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF226Q9NYT6 803 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MTCH2Q9Y6C9 303 aa2.24□□□□□ -2.05
UBXN4-208ENST00000490163 MTCL1Q9Y4B5 1905 aaKnown RBP2.23□□□□□ -2.05
UBXN4-208ENST00000490163 KIR2DL5BA0A0G2JN68 375 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 KIR2DL5BA0A0G2JPC4 375 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 C7orf77A4D0Y5 90 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 LINC01619G3V211 115 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 SIVA1O15304 175 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 OR1I1O60431 355 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 RDH16O75452 317 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 OR2A4O95047 310 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 IL5P05113 134 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 TPT1P13693 172 aaKnown RBP2.23□□□□□ -2.05
UBXN4-208ENST00000490163 IL2RGP31785 369 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 BTCP35070 178 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 FAUP35544 74 aaKnown RBP2.23□□□□□ -2.05
UBXN4-208ENST00000490163 RBM34P42696 430 aaKnown RBP2.23□□□□□ -2.05
UBXN4-208ENST00000490163 MFAP2P55001 183 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 OR10A3P58181 314 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 TGFBR3Q03167 851 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 TCP10Q12799 353 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 ARL6IP1Q15041 203 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 SLC9A3R2Q15599 337 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 KRTAP24-1Q3LI83 254 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF678Q5SXM1 525 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 COL5A1-AS1Q5SY13 56 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 C10orf91Q5T1B1 145 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 SDHAF4Q5VUM1 108 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 FBXW9Q5XUX1 488 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 GLT8D1Q68CQ7 371 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 KIR2DL5AQ8N109 375 aa2.23□□□□□ -2.05
UBXN4-208ENST00000490163 INO80EQ8NBZ0 244 aaPredicted RBP2.23□□□□□ -2.05
UBXN4-208ENST00000490163 OR52B6Q8NGF0 335 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms