RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 GNB1P62873 340 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 SLC25A30Q5SVS4 291 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 MEDAGQ5VYS4 303 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 ZNF529Q6P280 563 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 C8orf31Q8N9H6 132 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 OR52N1Q8NH53 320 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 NEK7Q8TDX7 302 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 DCUN1D4Q92564 292 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 UBE2E2Q96LR5 201 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 METTL9Q9H1A3 318 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 ISYNA1Q9NPH2 558 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 TAS2R4Q9NYW5 299 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 VSIG4Q9Y279 399 aa13.18□□□□□ -0.3
TOP3B-217ENST00000489581 LCE6AA0A183 80 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 ORC5O43913 435 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 CSTBP04080 98 aaKnown RBP13.17□□□□□ -0.3
TOP3B-217ENST00000489581 RPSAP08865 295 aaKnown RBP13.17□□□□□ -0.3
TOP3B-217ENST00000489581 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 FCGR1AP12314 374 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 SPNP16150 400 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 PPIFP30405 207 aaKnown RBP13.17□□□□□ -0.3
TOP3B-217ENST00000489581 VHLP40337 213 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 ZNF134P52741 427 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 SNRPGP62308 76 aaKnown RBP13.17□□□□□ -0.3
TOP3B-217ENST00000489581 SLC25A48Q6ZT89 311 aaKnown RBP13.17□□□□□ -0.3
TOP3B-217ENST00000489581 ZNF429Q86V71 674 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 SYS1Q8N2H4 156 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 OR10V1Q8NGI7 309 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 CENPNQ96H22 339 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-217ENST00000489581 ZMAT4Q9H898 229 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 TNCP24821 2201 aa13.17□□□□□ -0.3
TOP3B-217ENST00000489581 AIPO00170 330 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 OVOL1O14753 267 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 TXNL1O43396 289 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 SAP30O75446 220 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 MT-ND4P03905 459 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 SERPINA2P20848 420 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 RUNX1Q01196 453 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 MMDQ15546 238 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 ZIK1Q3SY52 487 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-217ENST00000489581 CT45A1Q5HYN5 189 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 ZFAND6Q6FIF0 208 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 ZNF439Q8NDP4 499 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 CT45A3Q8NHU0 189 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 CHCHD6Q9BRQ6 235 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 JAM3Q9BX67 310 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 GNG12Q9UBI6 72 aa13.16□□□□□ -0.3
TOP3B-217ENST00000489581 EPPK1P58107 5090 aaKnown RBP13.16□□□□□ -0.3
TOP3B-217ENST00000489581 SNTNA6NMZ2 147 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 ATP6V0E1O15342 81 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 RAB9AP51151 201 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 GTF2A1P52655 376 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-217ENST00000489581 ZNF137PP52743 207 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 GBX2P52951 348 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-217ENST00000489581 GABPB1Q06547 395 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-217ENST00000489581 Q3ZCU0 254 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 C1orf146Q5VVC0 180 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 PRR18Q8N4B5 295 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-217ENST00000489581 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-217ENST00000489581 MYCBPQ99417 103 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-217ENST00000489581 ALX4Q9H161 411 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-217ENST00000489581 PARP11Q9NR21 331 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 ERVK13-1Q9NX77 482 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 IL36GQ9NZH8 169 aa13.15□□□□□ -0.3
TOP3B-217ENST00000489581 A0A1W2PP11 408 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 C12orf77C9JDV5 145 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 IGLV1-40P01703 118 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 GP9P14770 177 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 CNTFRP26992 372 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 ZNF93P35789 620 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-217ENST00000489581 SLURP1P55000 103 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 LSAMPQ13449 338 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 DOC2BQ14184 412 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 SYT6Q5T7P8 510 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-217ENST00000489581 DDI2Q5TDH0 399 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 STX19Q8N4C7 294 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 OR1L1Q8NH94 360 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 RITA1Q96K30 269 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 CITED4Q96RK1 184 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 S100A13Q99584 98 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 OR51J1Q9H342 316 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 AMBNQ9NP70 447 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 TRAPPC2LQ9UL33 140 aa13.14□□□□□ -0.31
TOP3B-217ENST00000489581 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 FAM90A10PA6NDY2 464 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 TRIM64CA6NLI5 447 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 SPINT2O43291 252 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 ALPLP05186 524 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 CD2P06729 351 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 MRPL28Q13084 256 aaKnown RBP13.13□□□□□ -0.31
TOP3B-217ENST00000489581 MPV17LQ2QL34 196 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 SLC22A6Q4U2R8 563 aa13.13□□□□□ -0.31
TOP3B-217ENST00000489581 LINC00596Q86U02 117 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms