RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CDC34P49427 236 aaPredicted RBP1.58□□□□□ -2.16
RFC4-213ENST00000489028 DYNLL1P63167 89 aaKnown RBP1.58□□□□□ -2.16
RFC4-213ENST00000489028 FLI1Q01543 452 aaPredicted RBP1.58□□□□□ -2.16
RFC4-213ENST00000489028 MGAT3Q09327 533 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 C1DQ13901 141 aaKnown RBP1.58□□□□□ -2.16
RFC4-213ENST00000489028 HLA-DRB5Q30154 266 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 ZCWPW2Q504Y3 356 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 LDLRAD2Q5SZI1 272 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 CCDC122Q5T0U0 273 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 LAIR2Q6ISS4 152 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 SCGB1D4Q6XE38 83 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 MARCH3Q86UD3 253 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 ZFP82Q8N141 532 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 Q8N402 240 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 RPRMLQ8N4K4 120 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 C3orf22Q8N5N4 141 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 BPIFB6Q8NFQ5 453 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 OR5D18Q8NGL1 313 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 OR4C13Q8NGP0 309 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 SPPL2BQ8TCT7 592 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 CYGBQ8WWM9 190 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 GALMQ96C23 342 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 SLC22A4Q9H015 551 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 NSRP1Q9H0G5 558 aaKnown RBP1.58□□□□□ -2.16
RFC4-213ENST00000489028 GABARAPL1Q9H0R8 117 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 FAM206AQ9NX38 181 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 DHCR7Q9UBM7 475 aaKnown RBP1.58□□□□□ -2.16
RFC4-213ENST00000489028 TP53TG1Q9Y2A0 90 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 ICOSQ9Y6W8 199 aa1.58□□□□□ -2.16
RFC4-213ENST00000489028 OR5H14A6NHG9 310 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 METTL15A6NJ78 407 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 ZNF729A6NN14 1252 aaPredicted RBP1.57□□□□□ -2.16
RFC4-213ENST00000489028 B4DEV8 164 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 H3BSA7 217 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 ARL6IP5O75915 188 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 AHSA1O95433 338 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 GYPCP04921 128 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 FBP1P09467 338 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 LINC00614P0C842 121 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 CTSEP14091 401 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 PSMA1P25786 263 aaKnown RBP1.57□□□□□ -2.16
RFC4-213ENST00000489028 CLDN12P56749 244 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 GABARAPL2P60520 117 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 RPS11P62280 158 aaKnown RBP eCLIP1.57□□□□□ -2.16
RFC4-213ENST00000489028 SMAGPQ0VAQ4 97 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 FAM53BQ14153 422 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 CASP8Q14790 479 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 BCL2A1Q16548 175 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 LRRC26Q2I0M4 334 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 OGFRL1Q5TC84 451 aaPredicted RBP1.57□□□□□ -2.16
RFC4-213ENST00000489028 XKRXQ6PP77 449 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 Q6ZQT7 251 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 TCF23Q7RTU1 214 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 FAM19A3Q7Z5A8 133 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 VN1R4Q7Z5H5 301 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 NIT1Q86X76 327 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 KRTCAP2Q8N6L1 136 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 NATD1Q8N6N6 113 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 C1orf64Q8NEQ6 169 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 OR9I1Q8NGQ6 314 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 PACRGQ96M98 296 aaPredicted RBP1.57□□□□□ -2.16
RFC4-213ENST00000489028 KCTD7Q96MP8 289 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 OR2V2Q96R30 315 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 DHRS9Q9BPW9 319 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 SPZ1Q9BXG8 430 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 EIF5A2Q9GZV4 153 aaKnown RBP1.57□□□□□ -2.16
RFC4-213ENST00000489028 ARL6Q9H0F7 186 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 TRIM45Q9H8W5 580 aaPredicted RBP1.57□□□□□ -2.16
RFC4-213ENST00000489028 ZNF586Q9NXT0 402 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 TAS2R1Q9NYW7 299 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 UBAP1Q9NZ09 502 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 LINC00527Q9UJ94 153 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 MIA3Q5JRA6 1907 aa1.57□□□□□ -2.16
RFC4-213ENST00000489028 ADGRL1O94910 1474 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 MYO15BQ96JP2 1530 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 VWA8A3KMH1 1905 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 LOXHD1Q8IVV2 1947 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 IGHV3OR15-7A0A075B7D8 119 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 SMIM23A6NLE4 172 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 D6RAR5 112 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 F5H768 121 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 H3BQ85 93 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 K7EQS6 105 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 AZIN1O14977 448 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 PFDN6O15212 129 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 BIRC5O15392 142 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 KLHL2O95198 593 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 LTAP01374 205 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 IGHV3-53P01767 116 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 HBZP02008 142 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 TRGV3P03979 118 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 P0C880 135 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 COX5BP10606 129 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 GABRA1P14867 456 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 PRPS1L1P21108 318 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 CRABP2P29373 138 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 COILP38432 576 aaPredicted RBP1.56□□□□□ -2.16
RFC4-213ENST00000489028 IFNGR2P38484 337 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 SULT1A2P50226 295 aa1.56□□□□□ -2.16
RFC4-213ENST00000489028 H2BFSP57053 126 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms