RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 STPG2Q8N412 459 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 ARRDC1Q8N5I2 433 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 CCDC107Q8WV48 283 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 UBTD1Q9HAC8 227 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 BEX1Q9HBH7 125 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 LAMP3Q9UQV4 416 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 USF3Q68DE3 2245 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 TRAV39A0A0B4J263 110 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 A0A1B0GW55 424 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 FABP1P07148 127 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4L2P0CJ85 424 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4L3P0CJ86 424 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4L4P0CJ87 422 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4L5P0CJ88 424 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4L6P0CJ89 424 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4L7P0CJ90 424 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 TSPAN5P62079 268 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 AESQ08117 197 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 FGL1Q08830 312 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 ZNF880Q6PDB4 577 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4L9Q6RFH8 374 aaPredicted RBP9.13□□□□□ -0.95
COL21A1-211ENST00000488912 Q6ZS49 121 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 C1orf87Q8N0U7 546 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 ZNRF1Q8ND25 227 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 COQ2Q96H96 371 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 SEBOXQ9HB31 216 aaPredicted RBP9.13□□□□□ -0.95
COL21A1-211ENST00000488912 BIN3Q9NQY0 253 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 DUX4Q9UBX2 424 aa9.13□□□□□ -0.95
COL21A1-211ENST00000488912 PEX14O75381 377 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 GYPAP02724 150 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 NMBP08949 121 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 SCTP09683 121 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 SELLP14151 372 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 MUC1P15941 1255 aaPredicted RBP9.12□□□□□ -0.95
COL21A1-211ENST00000488912 ANXA7P20073 488 aaKnown RBP9.12□□□□□ -0.95
COL21A1-211ENST00000488912 C4BPBP20851 252 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 DHODHQ02127 395 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 SRSF7Q16629 238 aaKnown RBP eCLIP9.12□□□□□ -0.95
COL21A1-211ENST00000488912 ATRAIDQ6UW56 229 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 SLC25A21Q9BQT8 299 aaPredicted RBP9.12□□□□□ -0.95
COL21A1-211ENST00000488912 LIME1Q9H400 295 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 NECAP2Q9NVZ3 263 aa9.12□□□□□ -0.95
COL21A1-211ENST00000488912 LYNX1G3V0Z9 82 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 H7C1Q1 480 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 H7C2Y5 167 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 RLN1P04808 185 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 OR5H8P0DN80 308 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 LYNX1P0DP58 116 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 RAG2P55895 527 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 HERPUD1Q15011 391 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TPRX1Q8N7U7 411 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TERB2Q8NHR7 220 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 PFDN2Q9UHV9 154 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TRAPPC2LQ9UL33 140 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 VSIG4Q9Y279 399 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 PPIAL4EA0A075B759 164 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TMEM30CPA0ZSE6 113 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TRDCB7Z8K6 153 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 PPIAL4DF5H284 164 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 LGALS8O00214 317 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 LY6HO94772 140 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 PPIAL4FP0DN26 164 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 KIR2DS4P43632 304 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 KCNJ3P48549 501 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 NPY4RP50391 375 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 HLA-DRB3P79483 266 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 EDDM3AQ14507 147 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 KIR2DS1Q14954 304 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 HFEQ30201 348 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 KRBOX4Q5JUW0 171 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 ATPAF1Q5TC12 328 aaPredicted RBP9.11□□□□□ -0.95
COL21A1-211ENST00000488912 AADACL3Q5VUY0 350 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 ZNF660Q6AZW8 331 aaPredicted RBP9.11□□□□□ -0.95
COL21A1-211ENST00000488912 SLC35E4Q6ICL7 350 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 MOB1BQ7L9L4 216 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 LHFPL1Q86WI0 220 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TMEM17Q86X19 198 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 ZNF561Q8N587 486 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 SDSLQ96GA7 329 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 SNX22Q96L94 193 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 GAFA1Q96PS6 74 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 CCL13Q99616 98 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 SPOCK3Q9BQ16 436 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TMPRSS13Q9BYE2 586 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 RAB1BQ9H0U4 201 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 GSN-AS1Q9NRJ2 163 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 PPIAL4AQ9Y536 164 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 CRYBG3Q68DQ2 2970 aa9.11□□□□□ -0.95
COL21A1-211ENST00000488912 TRAV38-1A0A0B4J264 116 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 IGKV1-6A0A0C4DH72 117 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 A1L4Q6 167 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 OR5H14A6NHG9 310 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 K7N7A8 449 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 CLDN1O95832 211 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 COL8A2P25067 703 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 GLIPR1P48060 266 aa9.1□□□□□ -0.95
COL21A1-211ENST00000488912 MECP2P51608 486 aaKnown RBP9.1□□□□□ -0.95
COL21A1-211ENST00000488912 OPCMLQ14982 345 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms