RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 MYO15BQ96JP2 1530 aa1.08□□□□□ -2.24
PTPN4-212ENST00000488896 IGKV1D-43A0A0B4J1Z2 117 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 H3BRN7 92 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 PLPP3O14495 311 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 ANGP03950 147 aaKnown RBP1.07□□□□□ -2.24
PTPN4-212ENST00000488896 S100A9P06702 114 aaKnown RBP1.07□□□□□ -2.24
PTPN4-212ENST00000488896 CRYGDP07320 174 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 CCDC172P0C7W6 258 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 CPMP14384 443 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 ZNF7P17097 686 aaPredicted RBP1.07□□□□□ -2.24
PTPN4-212ENST00000488896 HSPA13P48723 471 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 INPP1P49441 399 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 KRTAP10-4P60372 401 aaPredicted RBP1.07□□□□□ -2.24
PTPN4-212ENST00000488896 TSPAN5P62079 268 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 TNNC1P63316 161 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 DEFA6Q01524 100 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 HTR4Q13639 388 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 ACSBG2Q5FVE4 666 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 AHSA2Q719I0 299 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 ZFAND2AQ8N6M9 145 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 OR4C16Q8NGL9 310 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 OR9I1Q8NGQ6 314 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 OR2Y1Q8NGV0 311 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 STK38LQ9Y2H1 464 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 SNX24Q9Y343 169 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 MINOS1-NBL1R4GNA1 71 aa1.07□□□□□ -2.24
PTPN4-212ENST00000488896 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 CR1P17927 2039 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 DSCAML1Q8TD84 2053 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 SLIT2O94813 1529 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 RP1L1Q8IWN7 2480 aaPredicted RBP1.06□□□□□ -2.24
PTPN4-212ENST00000488896 A0A0J9YX75 114 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 A8MWP6 167 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 TOR1AO14656 332 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 GZMBP10144 247 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 GABRA3P34903 492 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 C1QTNF8P60827 252 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 BSXQ3C1V8 233 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 EBLN2Q6P2I7 272 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 OR11L1Q8NGX0 322 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 FAM45AQ8TCE6 357 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 ZNF75CPQ92670 426 aaPredicted RBP1.06□□□□□ -2.24
PTPN4-212ENST00000488896 CAPZA3Q96KX2 299 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 BCL2L14Q9BZR8 327 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 OR51E2Q9H255 320 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 CXCL16Q9H2A7 254 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 AGPAT3Q9NRZ7 376 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 MAT2BQ9NZL9 334 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 WASHC3Q9Y3C0 194 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 HEY1Q9Y5J3 304 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 COL4A1P02462 1669 aa1.06□□□□□ -2.24
PTPN4-212ENST00000488896 MDC1Q14676 2089 aaKnown RBP1.06□□□□□ -2.24
PTPN4-212ENST00000488896 DNMT1P26358 1616 aaKnown RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 VPS37CA5D8V6 355 aaPredicted RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 K7EQS6 105 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 PSMD11O00231 422 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 FABP7O15540 132 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 DENRO43583 198 aaKnown RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 CCL2P13500 99 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 OR10A3P58181 314 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 DYNLL1P63167 89 aaKnown RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 BSPH1Q075Z2 132 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 PDGFRLQ15198 375 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 OR10J3Q5JRS4 329 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 SDIM1Q6ZPB5 146 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 ST13P4Q8IZP2 240 aaPredicted RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 C2orf73Q8N5S3 287 aaPredicted RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 ZNRF2Q8NHG8 242 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 IFT81Q8WYA0 676 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 DNAJC30Q96LL9 226 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 ZNF251Q9BRH9 671 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 GOLPH3Q9H4A6 298 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 C16orf95Q9H693 158 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 XKR8Q9H6D3 395 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 METTL17Q9H7H0 456 aaPredicted RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 FAM206AQ9NX38 181 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 MRM2Q9UI43 246 aaKnown RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 PSORS1C2Q9UIG4 136 aa1.05□□□□□ -2.24
PTPN4-212ENST00000488896 AMMECR1Q9Y4X0 333 aaPredicted RBP1.05□□□□□ -2.24
PTPN4-212ENST00000488896 CHD2O14647 1828 aaKnown RBP1.04□□□□□ -2.24
PTPN4-212ENST00000488896 A0A1W2PQL4 384 aaPredicted RBP1.04□□□□□ -2.24
PTPN4-212ENST00000488896 GOLGA8IPA6NC78 632 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 FNDC10F2Z333 226 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 CST4P01036 141 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 AKR1C4P17516 323 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 LCN1P31025 176 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 SPAM1P38567 509 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 ETV1P50549 477 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 OR2B6P58173 313 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 SKP2Q13309 424 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 ANGPT1Q15389 498 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 AADACL4Q5VUY2 407 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 TCAIMQ8N3R3 496 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 YIPF7Q8N8F6 280 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 ACBD4Q8NC06 268 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 MRAP2Q96G30 205 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 CHMP5Q9NZZ3 219 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 ENPP5Q9UJA9 477 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 POFUT2Q9Y2G5 429 aa1.04□□□□□ -2.24
PTPN4-212ENST00000488896 ABCB11O95342 1321 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms