RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CDRT1O95170 752 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 CD2P06729 351 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 GBX2P52951 348 aaPredicted RBP14.82□□□□□ -0.04
GGPS1-206ENST00000488594 DOC2BQ14184 412 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 C1orf146Q5VVC0 180 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 STEAP3Q658P3 488 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 STX19Q8N4C7 294 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 ZNF491Q8N8L2 437 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 CCDC107Q8WV48 283 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 JAM3Q9BX67 310 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 ISYNA1Q9NPH2 558 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 TAS2R4Q9NYW5 299 aa14.82□□□□□ -0.04
GGPS1-206ENST00000488594 IGHV3-43A0A0B4J1X8 118 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 SAC3D1A6NKF1 404 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 AIPO00170 330 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 GEMIN2O14893 280 aaKnown RBP14.81□□□□□ -0.04
GGPS1-206ENST00000488594 ZNF780AO75290 641 aaPredicted RBP14.81□□□□□ -0.04
GGPS1-206ENST00000488594 FADS2O95864 444 aaKnown RBP14.81□□□□□ -0.04
GGPS1-206ENST00000488594 MT-ND4P03905 459 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 IGHV3-43DP0DP04 118 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 PPIFP30405 207 aaKnown RBP14.81□□□□□ -0.04
GGPS1-206ENST00000488594 KIAA0141Q14154 515 aaPredicted RBP14.81□□□□□ -0.04
GGPS1-206ENST00000488594 ATAD3CQ5T2N8 411 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 ASPHD1Q5U4P2 390 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 ZNF497Q6ZNH5 498 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 UBALD1Q8TB05 177 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 NEK7Q8TDX7 302 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 S100A13Q99584 98 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 KLK15Q9H2R5 256 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 ZMAT4Q9H898 229 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 GNB4Q9HAV0 340 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 TMEM138Q9NPI0 162 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 GNG12Q9UBI6 72 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 ING4Q9UNL4 249 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 TENM2Q9NT68 2774 aa14.81□□□□□ -0.04
GGPS1-206ENST00000488594 E9PI62 339 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 SPINT2O43291 252 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 ALPLP05186 524 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 SLC2A2P11168 524 aaPredicted RBP14.8□□□□□ -0.04
GGPS1-206ENST00000488594 ZNF93P35789 620 aaPredicted RBP14.8□□□□□ -0.04
GGPS1-206ENST00000488594 VHLP40337 213 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 SOX2P48431 317 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 PPP3R1P63098 170 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 MMDQ15546 238 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 ZNF439Q8NDP4 499 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 GPR148Q8TDV2 347 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 OR51J1Q9H342 316 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 SPACA1Q9HBV2 294 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 ERVK13-1Q9NX77 482 aa14.8□□□□□ -0.04
GGPS1-206ENST00000488594 LCE6AA0A183 80 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 FAM90A10PA6NDY2 464 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 OVOL1O14753 267 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 SLC31A2O15432 143 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 LANCL1O43813 399 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 IGLV1-40P01703 118 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 FRMD6-AS1P0C7T7 363 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 SERPINA2P20848 420 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 LSAMPQ13449 338 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 CT45A1Q5HYN5 189 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 FAM53AQ6NSI3 398 aaPredicted RBP14.79□□□□□ -0.04
GGPS1-206ENST00000488594 CT45A3Q8NHU0 189 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 TRAPPC2LQ9UL33 140 aa14.79□□□□□ -0.04
GGPS1-206ENST00000488594 C12orf77C9JDV5 145 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 SAP30O75446 220 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 GTF2F2P13984 249 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 MYF6P23409 242 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 RASSF2P50749 326 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 ZNF134P52741 427 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 GNB1P62873 340 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 RAB40BQ12829 278 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 C6orf183Q5T699 404 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 DDI2Q5TDH0 399 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 TRAT1Q6PIZ9 186 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 OVCH2Q7RTZ1 564 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 DCUN1D4Q92564 292 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 Q96MT0 163 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 OR5B12Q96R08 314 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 CITED4Q96RK1 184 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 GHITMQ9H3K2 345 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 WSB1Q9Y6I7 421 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 SORL1Q92673 2214 aa14.78□□□□□ -0.04
GGPS1-206ENST00000488594 G3V318 75 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 ATP6V0E1O15342 81 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 HLA-DRB1P01911 266 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 GP9P14770 177 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 RAB9AP51151 201 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 GABPB1Q06547 395 aaPredicted RBP14.77□□□□□ -0.04
GGPS1-206ENST00000488594 GPR176Q14439 515 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 SYT6Q5T7P8 510 aaPredicted RBP14.77□□□□□ -0.04
GGPS1-206ENST00000488594 OR6Q1Q8NGQ2 317 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 RGP1Q92546 391 aaPredicted RBP14.77□□□□□ -0.04
GGPS1-206ENST00000488594 TMEM106AQ96A25 262 aa14.77□□□□□ -0.04
GGPS1-206ENST00000488594 TRAV41A0A0B4J266 112 aa14.76□□□□□ -0.05
GGPS1-206ENST00000488594 MCRIP1C9JLW8 97 aa14.76□□□□□ -0.05
GGPS1-206ENST00000488594 SPNP16150 400 aa14.76□□□□□ -0.05
GGPS1-206ENST00000488594 BDKRB2P30411 391 aa14.76□□□□□ -0.05
GGPS1-206ENST00000488594 ACTBP60709 375 aa14.76□□□□□ -0.05
GGPS1-206ENST00000488594 CCDC58Q4VC31 144 aa14.76□□□□□ -0.05
GGPS1-206ENST00000488594 OR10V1Q8NGI7 309 aa14.76□□□□□ -0.05
GGPS1-206ENST00000488594 PARP11Q9NR21 331 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms