RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 LINC01548A6NM66 108 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 H3BNX3 289 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 TXNL1O43396 289 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 ORC5O43913 435 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 CDRT1O95170 752 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 MOSP00540 346 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 CSTBP04080 98 aaKnown RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 ELANEP08246 267 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 NHLRC4P0CG21 123 aaPredicted RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 LIMS3P0CW19 117 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 LIMS4P0CW20 117 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 SERPINA2P20848 420 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 CD1BP29016 333 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF93P35789 620 aaPredicted RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 LUMP51884 338 aaPredicted RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 GTF2A1P52655 376 aaPredicted RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 GPR50Q13585 617 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 MPV17LQ2QL34 196 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 DEFB136Q30KP8 78 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 TMEM30BQ3MIR4 351 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 Q3ZCU0 254 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 CCDC58Q4VC31 144 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 C9orf66Q5T8R8 295 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 DDI2Q5TDH0 399 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 Q8N9W7 124 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 OR8H1Q8NGG4 311 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 OR52I1Q8NGK6 324 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 OR5M8Q8NGP6 311 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 OR52N1Q8NH53 320 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 RHOXF1Q8NHV9 184 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 RTN4IP1Q8WWV3 396 aaPredicted RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 TFAP2CQ92754 450 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 ARL11Q969Q4 196 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 ST6GALNAC6Q969X2 333 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 TMEM106AQ96A25 262 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 DUX3Q96PT4 197 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 METTL9Q9H1A3 318 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 DCLRE1BQ9H816 532 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 AMBNQ9NP70 447 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 TMEM138Q9NPI0 162 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 MRPS18AQ9NVS2 196 aaKnown RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 GFOD1Q9NXC2 390 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF580Q9UK33 172 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 RPL36Q9Y3U8 105 aaKnown RBP6.7□□□□□ -1.34
PRKCB-208ENST00000487674 STAB2Q8WWQ8 2551 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 DNAH9Q9NYC9 4486 aa6.7□□□□□ -1.34
PRKCB-208ENST00000487674 AIPO00170 330 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 GEMIN2O14893 280 aaKnown RBP6.69□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF780AO75290 641 aaPredicted RBP6.69□□□□□ -1.34
PRKCB-208ENST00000487674 IGHG4P01861 327 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 VDAC1P21796 283 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 CDX1P47902 265 aaPredicted RBP6.69□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF137PP52743 207 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 CFHR3Q02985 330 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 KIR2DS1Q14954 304 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 XAF1Q6GPH4 301 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 RPL22L1Q6P5R6 122 aaKnown RBP6.69□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF497Q6ZNH5 498 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 STX19Q8N4C7 294 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 FAM71E2Q8N5Q1 922 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 NEK7Q8TDX7 302 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 C4orf3Q8WVX3 66 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 S1PR3Q99500 378 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 S100A13Q99584 98 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 RASL11BQ9BPW5 248 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 C9orf16Q9BUW7 83 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 SPACA1Q9HBV2 294 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 RAB9BQ9NP90 201 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 PLSCR3Q9NRY6 295 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 ING4Q9UNL4 249 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 SIRT4Q9Y6E7 314 aaPredicted RBP6.69□□□□□ -1.34
PRKCB-208ENST00000487674 U3KQK5 164 aa6.69□□□□□ -1.34
PRKCB-208ENST00000487674 IGHV3-43A0A0B4J1X8 118 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 SEC14L6B5MCN3 397 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 SPINT2O43291 252 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 MT-ND4P03905 459 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 IGF1P05019 195 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 OR5H8P0DN80 308 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 IGHV3-43DP0DP04 118 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 GTF2F2P13984 249 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 BDKRB2P30411 391 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 SOX6P35712 828 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 RIPK1Q13546 671 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 FHL3Q13643 280 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 GPR176Q14439 515 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 SLC22A6Q4U2R8 563 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 ATAD3CQ5T2N8 411 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 C6orf183Q5T699 404 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 TMPRSS11AQ6ZMR5 421 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 LCNL1Q6ZST4 164 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 SLC25A48Q6ZT89 311 aaKnown RBP6.68□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF439Q8NDP4 499 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 UBALD1Q8TB05 177 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 CCDC107Q8WV48 283 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 APH1BQ8WW43 257 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 SMIM19Q96E16 107 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 PRR25Q96S07 402 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 ZNF184Q99676 751 aaPredicted RBP6.68□□□□□ -1.34
PRKCB-208ENST00000487674 HSPB9Q9BQS6 159 aa6.68□□□□□ -1.34
PRKCB-208ENST00000487674 FGF20Q9NP95 211 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms