RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 FRMD6-AS1P0C7T7 363 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 OR5H8P0DN80 308 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 RAB3AP20336 220 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZNF616Q08AN1 781 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZIK1Q3SY52 487 aaPredicted RBP15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 FAM27D1Q5T7N8 215 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZNF529Q6P280 563 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 ASCL4Q6XD76 172 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 TSEN15Q8WW01 171 aaKnown RBP15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 LGALS12Q96DT0 336 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 PDCD1LG2Q9BQ51 273 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 IFT22Q9H7X7 185 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 PALMDQ9NP74 551 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZNF107Q9UII5 783 aaPredicted RBP15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 ST3GAL6Q9Y274 331 aa15.11■□□□□ 0.01
SMPDL3A-202ENST00000487215 STARD9Q9P2P6 4700 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 MAGEB3O15480 346 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 TXNL1O43396 289 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 OR7C1O76099 320 aaPredicted RBP15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 PPIFP30405 207 aaKnown RBP15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 GNB1P62873 340 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 RUNX1Q01196 453 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 LHFPL3Q86UP9 236 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZNF429Q86V71 674 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZNF491Q8N8L2 437 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 CCDC107Q8WV48 283 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 OR5B12Q96R08 314 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 ISG20L2Q9H9L3 353 aaKnown RBP15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 VSIG4Q9Y279 399 aa15.1■□□□□ 0.01
SMPDL3A-202ENST00000487215 E9PI62 339 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 ORC5O43913 435 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 CDRT1O95170 752 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 SLC2A2P11168 524 aaPredicted RBP15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 VHLP40337 213 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZNF137PP52743 207 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 GBX2P52951 348 aaPredicted RBP15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 RBM11P57052 281 aaKnown RBP15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 RAB40BQ12829 278 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 Q3ZCU0 254 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 NHLRC3Q5JS37 347 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 TMEM65Q6PI78 240 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 SLC25A48Q6ZT89 311 aaKnown RBP15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 CBR4Q8N4T8 237 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 ZNF439Q8NDP4 499 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 OR5AK2Q8NH90 309 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 DCUN1D4Q92564 292 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 C9orf16Q9BUW7 83 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 TAS2R4Q9NYW5 299 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 WSB1Q9Y6I7 421 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 LYSTQ99698 3801 aa15.09■□□□□ 0.01
SMPDL3A-202ENST00000487215 G3V318 75 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 OVOL1O14753 267 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 GEMIN2O14893 280 aaKnown RBP15.08■□□□□ 0
SMPDL3A-202ENST00000487215 SPNP16150 400 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 MYF6P23409 242 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 OR52N1Q8NH53 320 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 CHCHD6Q9BRQ6 235 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 ZMAT4Q9H898 229 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 IL36GQ9NZH8 169 aa15.08■□□□□ 0
SMPDL3A-202ENST00000487215 RPL36Q9Y3U8 105 aaKnown RBP15.08■□□□□ 0
SMPDL3A-202ENST00000487215 H3BNX3 289 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 SAP30O75446 220 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 IGLV1-40P01703 118 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 MT-ND4P03905 459 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 GP9P14770 177 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 GABRB1P18505 474 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 SOX2P48431 317 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 ZNF134P52741 427 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 DOC2BQ14184 412 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 MMDQ15546 238 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 ATAD3CQ5T2N8 411 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 ZFAND6Q6FIF0 208 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 RHOXF1Q8NHV9 184 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 CITED4Q96RK1 184 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 JAM3Q9BX67 310 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 METTL9Q9H1A3 318 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 ERVK13-1Q9NX77 482 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 AASSQ9UDR5 926 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 ING4Q9UNL4 249 aa15.07■□□□□ 0
SMPDL3A-202ENST00000487215 C12orf77C9JDV5 145 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 AIPO00170 330 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 ATP6V0E1O15342 81 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 LSAMPQ13449 338 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 CT45A1Q5HYN5 189 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 ZNF497Q6ZNH5 498 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 LINC00596Q86U02 117 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 OR10V1Q8NGI7 309 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 CT45A3Q8NHU0 189 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 NEK7Q8TDX7 302 aa15.06■□□□□ 0
SMPDL3A-202ENST00000487215 RGP1Q92546 391 aaPredicted RBP15.06■□□□□ 0
SMPDL3A-202ENST00000487215 FAM90A10PA6NDY2 464 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 TRIM64CA6NLI5 447 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 CSTBP04080 98 aaKnown RBP15.05■□□□□ -0
SMPDL3A-202ENST00000487215 CD2P06729 351 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 SERPINA2P20848 420 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 RAB9AP51151 201 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 GABPB1Q06547 395 aaPredicted RBP15.05■□□□□ -0
SMPDL3A-202ENST00000487215 MPV17LQ2QL34 196 aa15.05■□□□□ -0
SMPDL3A-202ENST00000487215 DLX4Q92988 240 aaPredicted RBP15.05■□□□□ -0
SMPDL3A-202ENST00000487215 ALX4Q9H161 411 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms