RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CFTRP13569 1480 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PZPP20742 1482 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ERVK-7P63135 1459 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ABCC10Q5T3U5 1492 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CPDO75976 1380 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 A0A0G2JND7 137 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 EXOC1LA0A1B0GW35 172 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ANKRD20A5PA0PJZ0 165 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 TMEM72A0PK05 275 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 OR6C70A6NIJ9 312 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CEACAM18A8MTB9 384 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 G3V2T6 193 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 TSTD3H0UI37 97 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 M0QZ92 97 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PRMT5O14744 637 aaPredicted RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PHYHO14832 338 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 SGCEO43556 437 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 OR2B3O76000 313 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CIAO1O76071 339 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 VAPBO95292 243 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 AHSA1O95433 338 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 SHBGP04278 402 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CD5P06127 495 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CD28P10747 220 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 TAC1P20366 129 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PAX6P26367 422 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 HTR2CP28335 458 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ARR3P36575 388 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 RPL35P42766 123 aaKnown RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 GALR1P47211 349 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 INPP1P49441 399 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 RGS6P49758 472 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 NKX2-5P52952 324 aaPredicted RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 AQP4P55087 323 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 RAB2AP61019 212 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 RAB5BP61020 215 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 GRB2P62993 217 aaKnown RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 LAMTOR4Q0VGL1 99 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PMS2P3Q13401 168 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 NDUFAF6Q330K2 333 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 RBM48Q5RL73 367 aaKnown RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 RPL13AP3Q6NVV1 102 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 EPGNQ6UW88 154 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 C5orf46Q6UWT4 87 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CASP12Q6UXS9 341 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 RASSF6Q6ZTQ3 369 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 OR2M7Q8NG81 312 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 OR1M1Q8NGA1 313 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 NDNFQ8TB73 568 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 KLF14Q8TD94 323 aaPredicted RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PHF10Q8WUB8 498 aaKnown RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 MAFIPQ8WZ33 124 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 GTF2H4Q92759 462 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 YIPF5Q969M3 257 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ZBED3Q96IU2 234 aaPredicted RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 HYLS1Q96M11 299 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 TRNT1Q96Q11 434 aaKnown RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PFDN5Q99471 154 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 C20orf144Q9BQM9 153 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 COPS4Q9BT78 406 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CCDC32Q9BV29 185 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 MAP1LC3CQ9BXW4 147 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 TBL1XR1Q9BZK7 514 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 CHRNA10Q9GZZ6 450 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 HDHD2Q9H0R4 259 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ALX4Q9H161 411 aaPredicted RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 SDHAF2Q9NX18 166 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 COPZ2Q9P299 210 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ENPP5Q9UJA9 477 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 TFR2Q9UP52 801 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ENPP4Q9Y6X5 453 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 V9GYY9 64 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ABCA6Q8N139 1617 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ANKRD12Q6UB98 2062 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ATP7AQ04656 1500 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 URB2Q14146 1524 aaKnown RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PPLO60437 1756 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 USP42Q9H9J4 1324 aaKnown RBP1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 PREX1Q8TCU6 1659 aa1.9□□□□□ -2.11
SNRNP27-204ENST00000487029 ABCA8O94911 1581 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 MYH3P11055 1940 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 FRMPD1Q5SYB0 1578 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 CDC42BPGQ6DT37 1551 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 CEP170BQ9Y4F5 1589 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 PXDNLA1KZ92 1463 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 DENND4BO75064 1496 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 NAV1Q8NEY1 1877 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 IGKV1D-17A0A075B6S4 117 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 TRAV8-7A0A075B6U6 113 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 LOC102724200A0A096LPH7 203 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 A0A0G2JMP0 313 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 LOC100506127A0A0U1RQW1 187 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 A0A0X1KG70 313 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 FAM240AA0A1B0GVK7 77 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 GNG14A0A1W2PPG7 69 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 ZNF729A6NN14 1252 aaPredicted RBP1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 PRAMEF26H0Y7S4 382 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 M0QZK8 103 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 SULT1C2O00338 296 aa1.89□□□□□ -2.11
SNRNP27-204ENST00000487029 RFXANKO14593 260 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms