RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 RSRP1Q9BUV0 290 aa12.21□□□□□ -0.45
POLR2J3-204ENST00000486319 GCM1Q9NP62 436 aa12.21□□□□□ -0.45
POLR2J3-204ENST00000486319 CELSR1Q9NYQ6 3014 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 TRBV6-7A0A0A0MS04 114 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 TEX13DA0A0J9YY54 714 aaPredicted RBP12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 NPIPB11E5RHQ5 1161 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 E7EQL1 145 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 M0R233 179 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 TUSC2O75896 110 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 IFNA2P01563 188 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 PSG2P11465 335 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 RPS2P15880 293 aaKnown RBP12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 APOBEC3AP31941 199 aaPredicted RBP12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 PIGPP57054 158 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 PAX5Q02548 391 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 SRSF4Q08170 494 aaKnown RBP12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 SLC9A3R2Q15599 337 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 HMGN3Q15651 99 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 SPRNQ5BIV9 151 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 FAM209AQ5JX71 171 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 DCAF12L2Q5VW00 463 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 KCTD9Q7L273 389 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 OR10J5Q8NHC4 309 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 CISD1Q9NZ45 108 aaKnown RBP12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 KCNIP1Q9NZI2 227 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 KCNIP3Q9Y2W7 256 aa12.21□□□□□ -0.46
POLR2J3-204ENST00000486319 KIAA2026Q5HYC2 2103 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 G3V3Q6 166 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 ZNF205O95201 554 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 IRF2P14316 349 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 OR3A1P47881 315 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 FAM185AQ8N0U4 392 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 CD177Q8N6Q3 437 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 ZNF565Q8N9K5 539 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 ASCC1Q8N9N2 400 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 BOLLQ8N9W6 283 aaKnown RBP12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 OR11H4Q8NGC9 324 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 PDCD10Q9BUL8 212 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 RAB18Q9NP72 206 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 PPP1R3CQ9UQK1 317 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 LAMP3Q9UQV4 416 aa12.2□□□□□ -0.46
POLR2J3-204ENST00000486319 TANC2Q9HCD6 1990 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 IGKV1D-17A0A075B6S4 117 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 OOEPA6NGQ2 149 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 CD8AP01732 235 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 RBMXP38159 391 aaKnown RBP12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 HOXA4Q00056 320 aaPredicted RBP12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 FGL1Q08830 312 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 EFNB3Q15768 340 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 GSG1LQ6UXU4 331 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 C9orf62Q8N4C0 152 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 RTN4IP1Q8WWV3 396 aaPredicted RBP12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 GALNT14Q96FL9 552 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 KIRREL1Q96J84 757 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 SNX22Q96L94 193 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 MS4A5Q9H3V2 200 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 NAA60Q9H7X0 242 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 SLC2A9Q9NRM0 540 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 HSPB11Q9Y547 144 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 DSCAMO60469 2012 aa12.19□□□□□ -0.46
POLR2J3-204ENST00000486319 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 LRRC30A6NM36 301 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 B9A039 149 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 ZNF737O75373 536 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 SOD3P08294 240 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 GABRA2P47869 451 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 AESQ08117 197 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 ANKRD55Q3KP44 614 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 KRBOX4Q5JUW0 171 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 C6orf183Q5T699 404 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 LAMTOR1Q6IAA8 161 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 TRAT1Q6PIZ9 186 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 C5orf24Q7Z6I8 188 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 H1FOOQ8IZA3 346 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 PERPQ96FX8 193 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 VRK1Q99986 396 aaPredicted RBP12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 TMEM246Q9BRR3 403 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 SUCNR1Q9BXA5 334 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 SHARPINQ9H0F6 387 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 TAF9BQ9HBM6 251 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 PLSCR3Q9NRY6 295 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 COMMD9Q9P000 198 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 KIF25Q9UIL4 384 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 BOLA1Q9Y3E2 137 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 OR2W1Q9Y3N9 320 aa12.18□□□□□ -0.46
POLR2J3-204ENST00000486319 GPR31O00270 319 aa12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 CCSO14618 274 aa12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 MGST3O14880 152 aa12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 DANCRP0C864 163 aa12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 MUC1P15941 1255 aaPredicted RBP12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 RND3P61587 244 aa12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 CCL8P80075 99 aa12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 CYCSP99999 105 aaKnown RBP12.17□□□□□ -0.46
POLR2J3-204ENST00000486319 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms