RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 HSPB9Q9BQS6 159 aa15.09■□□□□ 0.01
COL27A1-205ENST00000485397 PAK1IP1Q9NWT1 392 aaPredicted RBP15.09■□□□□ 0.01
COL27A1-205ENST00000485397 AIPO00170 330 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 ZNF780AO75290 641 aaPredicted RBP15.08■□□□□ 0
COL27A1-205ENST00000485397 MOSP00540 346 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 GTF2F2P13984 249 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 IGFBP3P17936 291 aaPredicted RBP15.08■□□□□ 0
COL27A1-205ENST00000485397 DCKP27707 260 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 LUMP51884 338 aaPredicted RBP15.08■□□□□ 0
COL27A1-205ENST00000485397 RIPK1Q13546 671 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 CXorf66Q5JRM2 361 aaPredicted RBP15.08■□□□□ 0
COL27A1-205ENST00000485397 TMPRSS11AQ6ZMR5 421 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 RASL11BQ9BPW5 248 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 S100A14Q9HCY8 104 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 BABAM2Q9NXR7 383 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 CLEC2DQ9UHP7 191 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 COL7A1Q02388 2944 aa15.08■□□□□ 0
COL27A1-205ENST00000485397 TRBV5-5A0A0J9YX44 114 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 C12orf77C9JDV5 145 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 ZNF134P52741 427 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 F2RL1P55085 397 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 FOXE3Q13461 319 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 KIR2DS1Q14954 304 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 SYT6Q5T7P8 510 aaPredicted RBP15.07■□□□□ 0
COL27A1-205ENST00000485397 STX19Q8N4C7 294 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 ZNF439Q8NDP4 499 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 OR10V1Q8NGI7 309 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 OR4K15Q8NH41 348 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 GHSRQ92847 366 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 SMIM19Q96E16 107 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 GON7Q9BXV9 100 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 TRAPPC2LQ9UL33 140 aa15.07■□□□□ 0
COL27A1-205ENST00000485397 TRAV8-7A0A075B6U6 113 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 ELANEP08246 267 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 VHLP40337 213 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 CDX1P47902 265 aaPredicted RBP15.06■□□□□ 0
COL27A1-205ENST00000485397 CFHR3Q02985 330 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 DCTN2Q13561 401 aaKnown RBP15.06■□□□□ 0
COL27A1-205ENST00000485397 Q3ZCU0 254 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 CT45A1Q5HYN5 189 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 SLC25A48Q6ZT89 311 aaKnown RBP15.06■□□□□ 0
COL27A1-205ENST00000485397 PQLC1Q8N2U9 271 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 RNF152Q8N8N0 203 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 ZFP41Q8N8Y5 198 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 OR8U1Q8NH10 309 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 OR1L1Q8NH94 360 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 CT45A3Q8NHU0 189 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 MUL1Q969V5 352 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 CYYR1Q96J86 154 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 PRR25Q96S07 402 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 ETAA1Q9NY74 926 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 RCC2Q9P258 522 aaKnown RBP15.06■□□□□ 0
COL27A1-205ENST00000485397 GNG12Q9UBI6 72 aa15.06■□□□□ 0
COL27A1-205ENST00000485397 ZMAT5Q9UDW3 170 aaKnown RBP15.06■□□□□ 0
COL27A1-205ENST00000485397 A0A1W2PPK0 400 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 MCRIP1C9JLW8 97 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 RRP9O43818 475 aaKnown RBP15.05■□□□□ -0
COL27A1-205ENST00000485397 RAMP3O60896 148 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 GPX5O75715 221 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 HBZP02008 142 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 GP2P55259 537 aaKnown RBP15.05■□□□□ -0
COL27A1-205ENST00000485397 RPS11P62280 158 aaKnown RBP eCLIP15.05■□□□□ -0
COL27A1-205ENST00000485397 DMKNQ6E0U4 476 aaPredicted RBP15.05■□□□□ -0
COL27A1-205ENST00000485397 GLIPR1L1Q6UWM5 242 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 C10orf67Q8IYJ2 551 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 PRR18Q8N4B5 295 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 FAM71E2Q8N5Q1 922 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 ZNF555Q8NEP9 628 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 OR8H1Q8NGG4 311 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 OR5M8Q8NGP6 311 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 RYR3Q15413 4870 aa15.05■□□□□ -0
COL27A1-205ENST00000485397 SPINT2O43291 252 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 VDAC1P21796 283 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 SOX6P35712 828 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 ZNF137PP52743 207 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 GPR176Q14439 515 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 Q499Y3 187 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 C9orf66Q5T8R8 295 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 RAB12Q6IQ22 244 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 C5orf24Q7Z6I8 188 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 JAGN1Q8N5M9 183 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 KCTD7Q96MP8 289 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 BANF2Q9H503 90 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 SPACA1Q9HBV2 294 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 DIMT1Q9UNQ2 313 aaKnown RBP15.04■□□□□ -0
COL27A1-205ENST00000485397 MRPS28Q9Y2Q9 187 aaKnown RBP15.04■□□□□ -0
COL27A1-205ENST00000485397 EXOSC1Q9Y3B2 195 aaKnown RBP15.04■□□□□ -0
COL27A1-205ENST00000485397 LSM4Q9Y4Z0 139 aaKnown RBP15.04■□□□□ -0
COL27A1-205ENST00000485397 PEX16Q9Y5Y5 336 aa15.04■□□□□ -0
COL27A1-205ENST00000485397 TXNL1O43396 289 aa15.03■□□□□ -0
COL27A1-205ENST00000485397 IGHG4P01861 327 aa15.03■□□□□ -0
COL27A1-205ENST00000485397 RCC1P18754 421 aaPredicted RBP15.03■□□□□ -0
COL27A1-205ENST00000485397 MYL12AP19105 171 aa15.03■□□□□ -0
COL27A1-205ENST00000485397 ADARB1P78563 741 aaKnown RBP15.03■□□□□ -0
COL27A1-205ENST00000485397 C6orf183Q5T699 404 aa15.03■□□□□ -0
COL27A1-205ENST00000485397 GAPTQ8N292 157 aa15.03■□□□□ -0
COL27A1-205ENST00000485397 PGLYRP3Q96LB9 341 aa15.03■□□□□ -0
COL27A1-205ENST00000485397 SMPD3Q9NY59 655 aaPredicted RBP15.03■□□□□ -0
COL27A1-205ENST00000485397 CKLFQ9UBR5 152 aa15.03■□□□□ -0
COL27A1-205ENST00000485397 SCOCQ9UIL1 159 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms