RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ACTG1P63261 375 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 MXD1Q05195 221 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 HLA-DRB5Q30154 266 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 NDNFQ8TB73 568 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 DUX5Q96PT3 197 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 SSX3Q99909 188 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 FUNDC2Q9BWH2 189 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 CHIAQ9BZP6 476 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 MMP28Q9H239 520 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 DAPK2Q9UIK4 370 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 ETV7Q9Y603 341 aa12.65□□□□□ -0.38
RPP40-206ENST00000483546 TRAV39A0A0B4J263 110 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 TMEM89A2RUT3 159 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 C12orf77C9JDV5 145 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 HKR1P10072 659 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
RPP40-206ENST00000483546 TMEM50BP56557 158 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 ZNF880Q6PDB4 577 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 LIAT1Q6ZQX7 453 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 LHFPL4Q7Z7J7 247 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 OR10R2Q8NGX6 335 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 RFESDQ8TAC1 157 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 RAB3CQ96E17 227 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 PECRQ9BY49 303 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 RNF167Q9H6Y7 350 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 C12orf4Q9NQ89 552 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 GFOD1Q9NXC2 390 aa12.64□□□□□ -0.39
RPP40-206ENST00000483546 SMIM30A4D0T7 59 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 BUB1B-PAK6H3BSN5 160 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 J3QR06 171 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 RAB27BO00194 218 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 SDCBPO00560 298 aaPredicted RBP12.63□□□□□ -0.39
RPP40-206ENST00000483546 HBZP02008 142 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 CRYBA1P05813 215 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 RCC1P18754 421 aaPredicted RBP12.63□□□□□ -0.39
RPP40-206ENST00000483546 COMPP49747 757 aaPredicted RBP12.63□□□□□ -0.39
RPP40-206ENST00000483546 LOXL3P58215 753 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 MRPS15P82914 257 aaKnown RBP12.63□□□□□ -0.39
RPP40-206ENST00000483546 HTD2P86397 168 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 HMGN3Q15651 99 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 SSX2Q16385 188 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 STEAP3Q658P3 488 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 CCDC144NLQ6NUI1 221 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 BAIAP2L2Q6UXY1 529 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 LINC00311Q8N616 119 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 C17orf50Q8WW18 174 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 GCDHQ92947 438 aaPredicted RBP12.63□□□□□ -0.39
RPP40-206ENST00000483546 TAF9BQ9HBM6 251 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 CHMP1AQ9HD42 196 aaPredicted RBP12.63□□□□□ -0.39
RPP40-206ENST00000483546 RAB18Q9NP72 206 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 ABCB10Q9NRK6 738 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 ABRACLQ9P1F3 81 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 JPT1Q9UK76 154 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 PSG11Q9UQ72 335 aa12.63□□□□□ -0.39
RPP40-206ENST00000483546 A0A0B4J203 849 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 FAM172BPA6NC97 362 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 H3BUX3 64 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 ALDH3B2P48448 385 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 EFNB2P52799 333 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 FOXL1Q12952 345 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 PLAC9Q5JTB6 97 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 LY6G6FQ5SQ64 297 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 LDLRAD2Q5SZI1 272 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 ANKRD13BQ86YJ7 626 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 LGALS14Q8TCE9 139 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 GALMQ96C23 342 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
RPP40-206ENST00000483546 ATG5Q9H1Y0 275 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
RPP40-206ENST00000483546 AK3Q9UIJ7 227 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 PITPNC1Q9UKF7 332 aa12.62□□□□□ -0.39
RPP40-206ENST00000483546 A0A0A6YYH2 397 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 FAM181BA6NEQ2 426 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 A6NJ64 397 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 MFNGO00587 321 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 GPR137BO60478 399 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 RGS11O94810 467 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 CD3GP09693 182 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 CLEC2LP0C7M8 214 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 HIST1H1DP16402 221 aaKnown RBP12.61□□□□□ -0.39
RPP40-206ENST00000483546 BRS3P32247 399 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 PLA2G7Q13093 441 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 MADCAM1Q13477 382 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 LTC4SQ16873 150 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 IDNKQ5T6J7 187 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 GPR141Q7Z602 305 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 DTX3Q8N9I9 347 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 KCTD12Q96CX2 325 aaKnown RBP12.61□□□□□ -0.39
RPP40-206ENST00000483546 OCSTAMPQ9BR26 566 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 TNFRSF19Q9NS68 423 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 GNG12Q9UBI6 72 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 SPATA2Q9UM82 520 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 HILPDAQ9Y5L2 63 aa12.61□□□□□ -0.39
RPP40-206ENST00000483546 A0A1B0GUS0 222 aa12.6□□□□□ -0.39
RPP40-206ENST00000483546 LY6LH3BQJ8 138 aa12.6□□□□□ -0.39
RPP40-206ENST00000483546 GABARAPO95166 117 aa12.6□□□□□ -0.39
RPP40-206ENST00000483546 NDUFA7O95182 113 aa12.6□□□□□ -0.39
RPP40-206ENST00000483546 TFAP2AP05549 437 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms