RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 MRPS28Q9Y2Q9 187 aaKnown RBP9.61□□□□□ -0.87
SQSTM1-207ENST00000481335 TRAV8-7A0A075B6U6 113 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 SERPINE3A8MV23 424 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 AP4M1O00189 453 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 IGHV3-7P01780 117 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 IGLL1P15814 213 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 CAPGP40121 348 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 RPL23AP62750 156 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 DCTN2Q13561 401 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 DIAPH2-AS1Q14236 149 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 GLIPR1L1Q6UWM5 242 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 SLC25A48Q6ZT89 311 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 STPG2Q8N412 459 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 JAGN1Q8N5M9 183 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 Q8N6K4 173 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 LINC00482Q8N8I6 264 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 FBLIM1Q8WUP2 373 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 RTN4IP1Q8WWV3 396 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 DPF1Q92782 380 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 ST6GALNAC6Q969X2 333 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 DERL3Q96Q80 235 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 OR14A2Q96R54 314 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 ABCG5Q9H222 651 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 ZMAT5Q9UDW3 170 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 ZNF580Q9UK33 172 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 TRAPPC2LQ9UL33 140 aa9.6□□□□□ -0.87
SQSTM1-207ENST00000481335 A0A1W2PP11 408 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 MAGEA13PA6NCF6 341 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 SH2D7A6NKC9 451 aaPredicted RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 CASQ2O14958 399 aaPredicted RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 RRP9O43818 475 aaKnown RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 PRB2P02812 416 aaPredicted RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 UBBP0CG47 229 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 GP2P55259 537 aaKnown RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 EGFEM1PQ0D2K5 195 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 LRRC36Q1X8D7 754 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 SYT6Q5T7P8 510 aaPredicted RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 RNLSQ5VYX0 342 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 RAB12Q6IQ22 244 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 TEX38Q6PEX7 206 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 MOB3BQ86TA1 216 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 LYPD6Q86Y78 171 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 TMEM104Q8NE00 496 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 MUL1Q969V5 352 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 EAF1Q96JC9 268 aaPredicted RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 Q96M66 194 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 CST11Q9H112 138 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 VCXQ9H320 206 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 MBNL3Q9NUK0 354 aaKnown RBP9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 ETAA1Q9NY74 926 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 ZNF581Q9P0T4 197 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 PSORS1C1Q9UIG5 152 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 ERGIC3Q9Y282 383 aa9.59□□□□□ -0.87
SQSTM1-207ENST00000481335 TRAV39A0A0B4J263 110 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 C12orf77C9JDV5 145 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 MOSP00540 346 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 MGMTP16455 207 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 CELP19835 753 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 FUT3P21217 361 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 MYCNOSP40205 109 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 THBS3P49746 956 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 RCN1Q15293 331 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 LY6G6FQ5SQ64 297 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 OGFRL1Q5TC84 451 aaPredicted RBP9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 C10orf99Q6UWK7 81 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 OR2W3Q7Z3T1 314 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 MS4A15Q8N5U1 240 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 ZFP41Q8N8Y5 198 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 ZNF439Q8NDP4 499 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 CCDC107Q8WV48 283 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 ORAI1Q96D31 301 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 CHCHD6Q9BRQ6 235 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 GNG12Q9UBI6 72 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 JPT1Q9UK76 154 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 LRRC42Q9Y546 428 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 PEX16Q9Y5Y5 336 aa9.58□□□□□ -0.88
SQSTM1-207ENST00000481335 A0A1W2PPE3 182 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 NCBP2LA6PVI3 153 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 LANCL1O43813 399 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 PDCD6O75340 191 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 CRTAPO75718 401 aaPredicted RBP9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 HBZP02008 142 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 MAS1P04201 325 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 ELANEP08246 267 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 OR5H8P0DN80 308 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 GPR12P47775 334 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 HTD2P86397 168 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 GPR50Q13585 617 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 HNF4GQ14541 408 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 PNLIPRP3Q17RR3 467 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 ETV3LQ6ZN32 361 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 AHSA2Q719I0 299 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 ZNF329Q86UD4 541 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 MRPL41Q8IXM3 137 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 FAM71E2Q8N5Q1 922 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 NANOGP1Q8N7R0 232 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 RNF152Q8N8N0 203 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 Q8N9W7 124 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 PHYHIPQ92561 330 aa9.57□□□□□ -0.88
SQSTM1-207ENST00000481335 NOL4LQ96MY1 436 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 254.3 ms