RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 ZNF19P17023 458 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 NFYBP25208 207 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 OR3A4PP47883 348 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 THBS3P49746 956 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 SNU13P55769 128 aaKnown RBP5.09□□□□□ -1.59
LRCH3-216ENST00000481048 ZP1P60852 638 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 RPL23AP62750 156 aaKnown RBP5.09□□□□□ -1.59
LRCH3-216ENST00000481048 SLC35B1P78383 322 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 SCN1BQ07699 218 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 MADCAM1Q13477 382 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 KLF9Q13886 244 aaPredicted RBP5.09□□□□□ -1.59
LRCH3-216ENST00000481048 EBI3Q14213 229 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 GALEQ14376 348 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 IL13RA2Q14627 380 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 CDK5R1Q15078 307 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 C17orf58Q2M2W7 97 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 Q3ZCU0 254 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 C1orf146Q5VVC0 180 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 BAIAP2L2Q6UXY1 529 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 C5orf56Q8N8D9 126 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 OR13C9Q8NGT0 318 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 CNIH3Q8TBE1 160 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 TOMM40LQ969M1 308 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 RPL36ALQ969Q0 106 aaKnown RBP5.09□□□□□ -1.59
LRCH3-216ENST00000481048 PELI1Q96FA3 418 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 COQ2Q96H96 371 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 B9D2Q9BPU9 175 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 IDI2-AS1Q9NZ38 188 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 EXOGQ9Y2C4 368 aaKnown RBP5.09□□□□□ -1.59
LRCH3-216ENST00000481048 ORC6Q9Y5N6 252 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 TNCP24821 2201 aa5.09□□□□□ -1.59
LRCH3-216ENST00000481048 TENM3Q9P273 2699 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 MEIKINA0A087WXM9 373 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 WI2-2373I1.2A0A1W2PRP0 233 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 H0YHG0 523 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 FADS2O95864 444 aaKnown RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 IL1AP01583 271 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 GAPDHP04406 335 aaKnown RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 ALPLP05186 524 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 CD2P06729 351 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 SNRNP70P08621 437 aaKnown RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 HCKP08631 526 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 CCDC159P0C7I6 412 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 CALCBP10092 127 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 TMEM11P17152 192 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 RAB3AP20336 220 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 ZNF816Q0VGE8 651 aaPredicted RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 HES1Q14469 280 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 RBM39Q14498 530 aaKnown RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 ATXN7L3Q14CW9 347 aaPredicted RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 PNLIPRP3Q17RR3 467 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 KLHL22Q53GT1 634 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 PAN3Q58A45 887 aaKnown RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 NHLRC3Q5JS37 347 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 KHDC1LQ5JSQ8 128 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 C9orf152Q5JTZ5 239 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 ZNF691Q5VV52 312 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 RSBN1Q5VWQ0 802 aaPredicted RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 TEX38Q6PEX7 206 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 ASCL4Q6XD76 172 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 OR2W3Q7Z3T1 314 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 LINC00596Q86U02 117 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 TGIF2LXQ8IUE1 241 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 FOXRED2Q8IWF2 684 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 C10orf67Q8IYJ2 551 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 LINC00311Q8N616 119 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 C8orf31Q8N9H6 132 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 OR8H1Q8NGG4 311 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 OR51A4Q8NGJ6 313 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 OR52M1Q8NGK5 317 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 OR5AK2Q8NH90 309 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 RFT1Q96AA3 541 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 RNFT2Q96EX2 444 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 C4orf36Q96KX1 117 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 Q96MT0 163 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 SPACA5Q96QH8 159 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 P2RX4Q99571 388 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 CHCHD6Q9BRQ6 235 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 MRPS18AQ9NVS2 196 aaKnown RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 FAM118AQ9NWS6 357 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 PAK1IP1Q9NWT1 392 aaPredicted RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 CHCHD3Q9NX63 227 aaKnown RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 CALYQ9NYX4 217 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 IL36GQ9NZH8 169 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 KIF25Q9UIL4 384 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 PSG11Q9UQ72 335 aa5.08□□□□□ -1.6
LRCH3-216ENST00000481048 SIRT4Q9Y6E7 314 aaPredicted RBP5.08□□□□□ -1.6
LRCH3-216ENST00000481048 TRAV24A0A0B4J272 114 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 A0A1W2PPI3 338 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 FAM172BPA6NC97 362 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 SERPINE3A8MV23 424 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 AP4M1O00189 453 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 ORC5O43913 435 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 ZNF780AO75290 641 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-216ENST00000481048 CD1BP29016 333 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 GLP1RP43220 463 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 CDX1P47902 265 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-216ENST00000481048 GBX2P52951 348 aaPredicted RBP5.07□□□□□ -1.6
LRCH3-216ENST00000481048 RAB40BQ12829 278 aa5.07□□□□□ -1.6
LRCH3-216ENST00000481048 KIR2DS1Q14954 304 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms