RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PLA1AQ53H76 456 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 LDLRAD2Q5SZI1 272 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 FAM53AQ6NSI3 398 aaPredicted RBP12.29□□□□□ -0.44
ABCF3-213ENST00000480539 TRAT1Q6PIZ9 186 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 CROCCP3Q8IVE0 287 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 OR4P4Q8NGL7 312 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 JMJD8Q96S16 334 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 DCSTAMPQ9H295 470 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 TAF9BQ9HBM6 251 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 MBNL3Q9NUK0 354 aaKnown RBP12.29□□□□□ -0.44
ABCF3-213ENST00000480539 KCNK7Q9Y2U2 307 aa12.29□□□□□ -0.44
ABCF3-213ENST00000480539 KIAA2026Q5HYC2 2103 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 SCAND1P57086 179 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 FAM189A2Q15884 450 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 KRTAP24-1Q3LI83 254 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 Q6YL49 198 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 MOB1BQ7L9L4 216 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 LDLRAD3Q86YD5 345 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 DYNAPQ8N1N2 210 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 OR10V1Q8NGI7 309 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
ABCF3-213ENST00000480539 PRDM13Q9H4Q3 707 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 KCNIP1Q9NZI2 227 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 ABRACLQ9P1F3 81 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 ELF5Q9UKW6 265 aaPredicted RBP12.28□□□□□ -0.44
ABCF3-213ENST00000480539 SPATA2Q9UM82 520 aa12.28□□□□□ -0.44
ABCF3-213ENST00000480539 TBL2Q9Y4P3 447 aaKnown RBP12.28□□□□□ -0.44
ABCF3-213ENST00000480539 A0A087X0M5 115 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 A0A1B0GX30 115 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 A0A1W2PPE3 182 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 F2RL2O00254 374 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 TOR1AO14656 332 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 NOL3O60936 208 aaKnown RBP12.27□□□□□ -0.45
ABCF3-213ENST00000480539 CD3GP09693 182 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 HLA-DRB3P79483 266 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 MRPS15P82914 257 aaKnown RBP12.27□□□□□ -0.45
ABCF3-213ENST00000480539 GNMTQ14749 295 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 SPCS2Q15005 226 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 SLC9A3R2Q15599 337 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 HMGN3Q15651 99 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 HLA-DRB5Q30154 266 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 OR10A7Q8NGE5 316 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 ZNF596Q8TC21 504 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 SSMEM1Q8WWF3 244 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 RAB9BQ9NP90 201 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 GFOD1Q9NXC2 390 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 PSG11Q9UQ72 335 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 HILPDAQ9Y5L2 63 aa12.27□□□□□ -0.45
ABCF3-213ENST00000480539 TRBV6-6A0A0A6YYG2 114 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 TMEM235A6NFC5 223 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 TRIM77I1YAP6 450 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 SCGNO76038 276 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 IGLV1-47P01700 117 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 FCGR3AP08637 254 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 LOXL3P58215 753 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 SSX2Q16385 188 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 UBE2NLQ5JXB2 153 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 IZUMO1Q8IYV9 350 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 SAMD12Q8N8I0 201 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 BEND2Q8NDZ0 799 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 OR9G1Q8NH87 305 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 RAB2BQ8WUD1 216 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 MAFIPQ8WZ33 124 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 MMP28Q9H239 520 aa12.26□□□□□ -0.45
ABCF3-213ENST00000480539 RIMS4Q9H426 269 aaPredicted RBP12.26□□□□□ -0.45
ABCF3-213ENST00000480539 RNF212BA8MTL3 300 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 SERPINE3A8MV23 424 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 J3QR06 171 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 TMEM127O75204 238 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 HTR1DP28221 377 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 PPP1CCP36873 323 aaKnown RBP12.25□□□□□ -0.45
ABCF3-213ENST00000480539 IER3P46695 156 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 TMBIM6P55061 237 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 ARFRP1Q13795 201 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 MINOS1Q5TGZ0 78 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 ZNF554Q86TJ5 538 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.25□□□□□ -0.45
ABCF3-213ENST00000480539 OR52L2PQ8NGH6 319 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 OR52M1Q8NGK5 317 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 NUDCD2Q8WVJ2 157 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 IL1F10Q8WWZ1 152 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 PHF21AQ96BD5 680 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 ISOC1Q96CN7 298 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 CHIAQ9BZP6 476 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 Q9N2K0 584 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 COMMD3Q9UBI1 195 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 MINOS1-NBL1R4GNA1 71 aa12.25□□□□□ -0.45
ABCF3-213ENST00000480539 BTBD17A6NE02 478 aa12.24□□□□□ -0.45
ABCF3-213ENST00000480539 BUB1B-PAK6H3BSN5 160 aa12.24□□□□□ -0.45
ABCF3-213ENST00000480539 H3BUX3 64 aa12.24□□□□□ -0.45
ABCF3-213ENST00000480539 SLC31A2O15432 143 aa12.24□□□□□ -0.45
ABCF3-213ENST00000480539 RNASE1P07998 156 aaKnown RBP12.24□□□□□ -0.45
ABCF3-213ENST00000480539 RORCP51449 518 aa12.24□□□□□ -0.45
ABCF3-213ENST00000480539 PRRX1P54821 245 aa12.24□□□□□ -0.45
ABCF3-213ENST00000480539 KRTAP21-3Q3LHN1 58 aa12.24□□□□□ -0.45
ABCF3-213ENST00000480539 TMEM30BQ3MIR4 351 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms