RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 PF4V1P10720 104 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 SLC6A1P30531 599 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 GNG10P50151 68 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 LOXL3P58215 753 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 TMEM95Q3KNT9 176 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 ACSM3Q53FZ2 586 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 SYT6Q5T7P8 510 aaPredicted RBP11.98□□□□□ -0.49
PRKN-207ENST00000479615 UNQ9370/PRO34162Q6UXP9 181 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 IZUMO1Q8IYV9 350 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 COMMD1Q8N668 190 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 OR8H1Q8NGG4 311 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 CCDC107Q8WV48 283 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 Q96M66 194 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 VCX3BQ9H321 246 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 KCNIP1Q9NZI2 227 aa11.98□□□□□ -0.49
PRKN-207ENST00000479615 IGHV1-3A0A0C4DH29 117 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 PTGES3LE9PB15 166 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 G3V4G9 280 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 PIN1P1O15428 100 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 DUS4LO95620 317 aaKnown RBP11.97□□□□□ -0.49
PRKN-207ENST00000479615 IGHV3-7P01780 117 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 CD1BP29016 333 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 SLC35B1P78383 322 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 GABPB1Q06547 395 aaPredicted RBP11.97□□□□□ -0.49
PRKN-207ENST00000479615 TRAM1Q15629 374 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 C9orf152Q5JTZ5 239 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 UTF1Q5T230 341 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 LYG1Q8N1E2 194 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 C5orf56Q8N8D9 126 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 OR2T10Q8NGZ9 312 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 GON7Q9BXV9 100 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 ZNF581Q9P0T4 197 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 GNG12Q9UBI6 72 aa11.97□□□□□ -0.49
PRKN-207ENST00000479615 TRAV39A0A0B4J263 110 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 PSMB11A5LHX3 300 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 C12orf77C9JDV5 145 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 PDCD6O75340 191 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 BPNT1O95861 308 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 IGKV1D-33P01593 117 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 IGKV1-33P01594 117 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 ZNF137PP52743 207 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 SLC25A48Q6ZT89 311 aaKnown RBP11.96□□□□□ -0.49
PRKN-207ENST00000479615 MOB3BQ86TA1 216 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 TGIF2LXQ8IUE1 241 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 FOXRED2Q8IWF2 684 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 TMEM104Q8NE00 496 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 KCNG3Q8TAE7 436 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 RTN4IP1Q8WWV3 396 aaPredicted RBP11.96□□□□□ -0.49
PRKN-207ENST00000479615 ST6GALNAC6Q969X2 333 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 NEDD4LQ96PU5 975 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 BANF2Q9H503 90 aa11.96□□□□□ -0.49
PRKN-207ENST00000479615 MBNL3Q9NUK0 354 aaKnown RBP11.96□□□□□ -0.49
PRKN-207ENST00000479615 ERICH4A6NGS2 130 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 RGS11O94810 467 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 MOSP00540 346 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 IGHG2P01859 326 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 PF4P02776 101 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 SRMP19623 302 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 CD33P20138 364 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 PSMA1P25786 263 aaKnown RBP11.95□□□□□ -0.5
PRKN-207ENST00000479615 HTD2P86397 168 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 MED22Q15528 200 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 HSD17B12Q53GQ0 312 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 LY6G6FQ5SQ64 297 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 C1orf100Q5SVJ3 147 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 OR51D1Q8NGF3 324 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 UFD1Q92890 307 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 ISYNA1Q9NPH2 558 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 ZFP57Q9NU63 452 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 LIN7CQ9NUP9 197 aaKnown RBP11.95□□□□□ -0.5
PRKN-207ENST00000479615 JPT1Q9UK76 154 aa11.95□□□□□ -0.5
PRKN-207ENST00000479615 LSM2Q9Y333 95 aaKnown RBP11.95□□□□□ -0.5
PRKN-207ENST00000479615 A0A1W2PPE3 182 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 SERPINE3A8MV23 424 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 HBZP02008 142 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 CD37P11049 281 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 SLC35A2P78381 396 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 DIAPH2-AS1Q14236 149 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 HNF4GQ14541 408 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 TCTEX1D4Q5JR98 221 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 CEACAM19Q7Z692 300 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 SLC35E3Q7Z769 313 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 OR4K15Q8NH41 348 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 EAF1Q96JC9 268 aaPredicted RBP11.94□□□□□ -0.5
PRKN-207ENST00000479615 TMED9Q9BVK6 235 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 GPR61Q9BZJ8 451 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
PRKN-207ENST00000479615 DUSP21Q9H596 190 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 TAF9BQ9HBM6 251 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 OR2S2Q9NQN1 319 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 NECAP2Q9NVZ3 263 aa11.94□□□□□ -0.5
PRKN-207ENST00000479615 A0A1W2PRX2 142 aa11.93□□□□□ -0.5
PRKN-207ENST00000479615 NCBP2LA6PVI3 153 aaKnown RBP11.93□□□□□ -0.5
PRKN-207ENST00000479615 AP4M1O00189 453 aa11.93□□□□□ -0.5
PRKN-207ENST00000479615 LANCL1O43813 399 aa11.93□□□□□ -0.5
PRKN-207ENST00000479615 ARL6IP5O75915 188 aa11.93□□□□□ -0.5
PRKN-207ENST00000479615 MPIG6BO95866 241 aa11.93□□□□□ -0.5
PRKN-207ENST00000479615 UCHL1P09936 223 aa11.93□□□□□ -0.5
PRKN-207ENST00000479615 HTR2CP28335 458 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms