RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PRDX4Q13162 271 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 PEA15Q15121 130 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 LRRC10Q5BKY1 277 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 NKAPLQ5M9Q1 402 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 KPRPQ5T749 579 aaPredicted RBP5.49□□□□□ -1.53
VCP-205ENST00000479300 OR2G6Q5TZ20 316 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 RUSC1-AS1Q66K80 236 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 ZNF826PQ6ZT77 177 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 CPOQ8IVL8 374 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 ZNF561Q8N587 486 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 TMEM185AQ8NFB2 350 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 BEST4Q8NFU0 473 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 OR4F5Q8NH21 305 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 OTOSQ8NHW6 89 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 LINC01006Q8NI28 216 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 FAM110DQ8TAY7 271 aaPredicted RBP5.49□□□□□ -1.53
VCP-205ENST00000479300 THAP6Q8TBB0 222 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 RXFP4Q8TDU9 374 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 RNF133Q8WVZ7 376 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 H1FXQ92522 213 aaKnown RBP5.49□□□□□ -1.53
VCP-205ENST00000479300 PIGCQ92535 297 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 RFKQ969G6 155 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 SPSB4Q96A44 273 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 PFDN5Q99471 154 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 SEC11CQ9BY50 192 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 TMPRSS5Q9H3S3 457 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 NOX4Q9NPH5 578 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 TVP23BQ9NYZ1 205 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 ONECUT1Q9UBC0 465 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 IKZF2Q9UKS7 526 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 GTF2A1LQ9UNN4 478 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 EXOGQ9Y2C4 368 aaKnown RBP5.49□□□□□ -1.53
VCP-205ENST00000479300 FAM96BQ9Y3D0 163 aa5.49□□□□□ -1.53
VCP-205ENST00000479300 IGHV3OR15-7A0A075B7D8 119 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 FXYD6-FXYD2A0A087WZ82 144 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 TRAV1-2A0A0B4J238 106 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 A0A1B0GUS0 222 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 hCG_38984A0A1B0GV85 526 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 MEX3AA1L020 520 aaKnown RBP5.48□□□□□ -1.53
VCP-205ENST00000479300 ACOD1A6NK06 481 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 RFPL4AA6NLU0 287 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 ZNF850A8MQ14 1090 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 RFPL4AL1F8VTS6 287 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 DVL1O14640 695 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 CDIPTO14735 213 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 TIMM23O14925 209 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 ARPC1BO15143 372 aaKnown RBP5.48□□□□□ -1.53
VCP-205ENST00000479300 BCL2L11O43521 198 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 OR2F2O95006 317 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 NDUFB6O95139 128 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 PTBP3O95758 552 aaKnown RBP5.48□□□□□ -1.53
VCP-205ENST00000479300 MELTFP08582 738 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 CD3GP09693 182 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 RAB4AP20338 218 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 CFHR2P36980 270 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 GDNFP39905 211 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 TAS2R43P59537 309 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 RAB2AP61019 212 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 SNRPEP62304 92 aaKnown RBP5.48□□□□□ -1.53
VCP-205ENST00000479300 PDZK1IP1Q13113 114 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 OR2F1Q13607 317 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 TAF9Q16594 264 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 LINC01590Q5TEZ4 76 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 TMEM88Q6PEY1 159 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 Q6YL49 198 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 IL34Q6ZMJ4 242 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 SSX9Q7RTT3 188 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 REC114Q7Z4M0 266 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 CBLN2Q8IUK8 224 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 ZDHHC23Q8IYP9 409 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 KCNRGQ8N5I3 272 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 ZNF671Q8TAW3 534 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 C15orf40Q8WUR7 153 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 ASB17Q8WXJ9 295 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 LHX4Q969G2 390 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 ARL11Q969Q4 196 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 CCL13Q99616 98 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 TMED9Q9BVK6 235 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 MFFQ9GZY8 342 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 FXYD6Q9H0Q3 95 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 CNTD2Q9H8S5 307 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 HRASLSQ9HDD0 168 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 SMCO4Q9NRQ5 59 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 GHRLQ9UBU3 117 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 RHBDD3Q9Y3P4 386 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 RNF114Q9Y508 228 aa5.48□□□□□ -1.53
VCP-205ENST00000479300 TRBV23-1A0A0A0MS06 115 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 IGHV1-69DA0A0B4J2H0 117 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 ZNF816-ZNF321PA0A0X1KG74 233 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 TMEM269A0A1B0GVZ9 245 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 A0A1W2PPH5 198 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 KANTRA0A1W2PQU2 76 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 COLCA2A8K830 154 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 C22orf46C9J442 243 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 GABARAPH6UMI1 98 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 FGF16O43320 207 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 SPDEFO95238 335 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 CST4P01036 141 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 IGHV1-69P01742 117 aa5.47□□□□□ -1.53
VCP-205ENST00000479300 SFTPBP07988 381 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms