RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 AZIN1O14977 448 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 KLHL2O95198 593 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 GPR75O95800 540 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 TRGV3P03979 118 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 CFL1P23528 166 aaKnown RBP2.83□□□□□ -1.96
UPF3B-203ENST00000478840 EVI2BP34910 448 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 FMODQ06828 376 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 CYHR1Q6ZMK1 362 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 TMEM136Q6ZRR5 245 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 FER1L6-AS1Q8NA97 138 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 TNFAIP8L1Q8WVP5 186 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 GALMQ96C23 342 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 PACRGQ96M98 296 aaPredicted RBP2.83□□□□□ -1.96
UPF3B-203ENST00000478840 DHRS9Q9BPW9 319 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 TMEM208Q9BTX3 173 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF492Q9P255 531 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 V9GYY5 206 aaPredicted RBP2.83□□□□□ -1.96
UPF3B-203ENST00000478840 MYO5BQ9ULV0 1848 aa2.83□□□□□ -1.96
UPF3B-203ENST00000478840 H3BSA7 217 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 SLC16A4O15374 487 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 CRTAPO75718 401 aaPredicted RBP2.82□□□□□ -1.96
UPF3B-203ENST00000478840 IGKV1D-33P01593 117 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 IGKV1-33P01594 117 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 UGT2B7P16662 529 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF14P17017 642 aaPredicted RBP2.82□□□□□ -1.96
UPF3B-203ENST00000478840 MLLT11Q13015 90 aaPredicted RBP2.82□□□□□ -1.96
UPF3B-203ENST00000478840 C1DQ13901 141 aaKnown RBP2.82□□□□□ -1.96
UPF3B-203ENST00000478840 PRR9Q5T870 116 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 IGFL3Q6UXB1 125 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 SCGB1D4Q6XE38 83 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 Q6ZQT7 251 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 OR51H1Q8NH63 302 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 ZNRF2Q8NHG8 242 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 ASB13Q8WXK3 278 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 ARL6Q9H0F7 186 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 GABARAPL1Q9H0R8 117 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 MS4A6AQ9H2W1 248 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 PRO0461Q9UI25 63 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 ICOSQ9Y6W8 199 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 ADCY9O60503 1353 aa2.82□□□□□ -1.96
UPF3B-203ENST00000478840 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.82□□□□□ -1.96
UPF3B-203ENST00000478840 KRT7P08729 469 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 PSMA1P25786 263 aaKnown RBP2.81□□□□□ -1.96
UPF3B-203ENST00000478840 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 MIPP30301 263 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 ADORA1P30542 326 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 IFNGR2P38484 337 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 H2BFSP57053 126 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 SMAGPQ0VAQ4 97 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 BIKQ13323 160 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 PDZD11Q5EBL8 140 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 SPATA31B1PQ5VZV4 182 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 Q6ZRU5 148 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 ADM2Q7Z4H4 148 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 NIT1Q86X76 327 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 ZBTB8OSQ8IWT0 167 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 DNAAF3Q8N9W5 541 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 RNF133Q8WVZ7 376 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 OR2V2Q96R30 315 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 TRIB3Q96RU7 358 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 TSSK6Q9BXA6 273 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 GNB1LQ9BYB4 327 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 FAM206AQ9NX38 181 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 GLS2Q9UI32 602 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 ADGRL1O94910 1474 aa2.81□□□□□ -1.96
UPF3B-203ENST00000478840 A0A1W2PP64 1363 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 ABCC11Q96J66 1382 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 ARGFXA6NJG6 315 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 SSNA1O43805 119 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 ARL6IP5O75915 188 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 IGHV3-53P01767 116 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 APOEP02649 317 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 S100A2P29034 98 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 DAD1P61803 113 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 IHHQ14623 411 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 COQ5Q5HYK3 327 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 EBLN2Q6P2I7 272 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 TCF23Q7RTU1 214 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 YIPF7Q8N8F6 280 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF680Q8NEM1 530 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 C1orf64Q8NEQ6 169 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 BPIFB6Q8NFQ5 453 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 OR4A5Q8NH83 315 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 SPPL2BQ8TCT7 592 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 SLC37A2Q8TED4 501 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 GTSF1LQ9H1H1 148 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 C11orf49Q9H6J7 331 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF286AQ9HBT8 521 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 PARVAQ9NVD7 372 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 UBAP1Q9NZ09 502 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 LINC00527Q9UJ94 153 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 SNX10Q9Y5X0 201 aa2.8□□□□□ -1.96
UPF3B-203ENST00000478840 H3BMM0 161 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 S100A6P06703 90 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 FBP1P09467 338 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 LINC00614P0C842 121 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 PSMB3P49720 205 aa2.79□□□□□ -1.96
UPF3B-203ENST00000478840 RPS11P62280 158 aaKnown RBP eCLIP2.79□□□□□ -1.96
UPF3B-203ENST00000478840 TRMT12Q53H54 448 aaKnown RBP2.79□□□□□ -1.96
UPF3B-203ENST00000478840 ZNF561Q8N587 486 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms