RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CXorf66Q5JRM2 361 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 XAF1Q6GPH4 301 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 C10orf99Q6UWK7 81 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 ZNF695Q8IW36 515 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 PACRGLQ8N7B6 248 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 NKAIN3Q8N8D7 197 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 CYGBQ8WWM9 190 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 GHSRQ92847 366 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 EAF1Q96JC9 268 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 ETAA1Q9NY74 926 aa11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 MRPS28Q9Y2Q9 187 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-209ENST00000478349 C15orf65H3BRN8 121 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 MYL12BO14950 172 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 GLAP06280 429 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 IGFBP3P17936 291 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 VDAC1P21796 283 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 GPR12P47775 334 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 REG1BP48304 166 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 PNLIPRP3Q17RR3 467 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 VAX1Q5SQQ9 334 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 UTF1Q5T230 341 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 STEAP3Q658P3 488 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 DMKNQ6E0U4 476 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 AWAT2Q6E213 333 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 ZNF554Q86TJ5 538 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 OR8U1Q8NH10 309 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 RTN4IP1Q8WWV3 396 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 NOL4LQ96MY1 436 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 ABCG5Q9H222 651 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 KCNIP1Q9NZI2 227 aa11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 RCC2Q9P258 522 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 SIRT4Q9Y6E7 314 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-209ENST00000478349 TRAV39A0A0B4J263 110 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 A0A1W2PPE3 182 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 K7EIL1 84 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 MT-ND4P03905 459 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 CD69Q07108 199 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 FOXE3Q13461 319 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 DIAPH2-AS1Q14236 149 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 RAB12Q6IQ22 244 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 GLIPR1L1Q6UWM5 242 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 C8orf86Q6ZUL3 223 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 CCDC107Q8WV48 283 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 MUL1Q969V5 352 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 CST11Q9H112 138 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 CNOT2Q9NZN8 540 aaKnown RBP11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 GHRLQ9UBU3 117 aa11.41□□□□□ -0.58
SMARCE1-209ENST00000478349 IGHV3-72A0A0B4J1Y9 119 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 CRTAPO75718 401 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 RGS11O94810 467 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 ELANEP08246 267 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 SOX6P35712 828 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 CAPGP40121 348 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 ZNF137PP52743 207 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 GPR50Q13585 617 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 DOC2BQ14184 412 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 SYT6Q5T7P8 510 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 ETV3LQ6ZN32 361 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 SLC25A48Q6ZT89 311 aaKnown RBP11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 C8orf59Q8N0T1 100 aaPredicted RBP11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 PRR18Q8N4B5 295 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 DHRSXQ8N5I4 330 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 Q8N6K4 173 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 OR5M8Q8NGP6 311 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 OR14A2Q96R54 314 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 CHCHD6Q9BRQ6 235 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 UQCC2Q9BRT2 126 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 VCXQ9H320 206 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 PEX16Q9Y5Y5 336 aa11.4□□□□□ -0.58
SMARCE1-209ENST00000478349 IGHV3-43A0A0B4J1X8 118 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 C12orf77C9JDV5 145 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 RAMP3O60896 148 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 UBBP0CG47 229 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 IGHV3-43DP0DP04 118 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 MGMTP16455 207 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 FUT3P21217 361 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 RAB25P57735 213 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 DGCR2P98153 550 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 ST3GAL4Q11206 333 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 OR13C5Q8NGS8 318 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 ST6GALNAC6Q969X2 333 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 PGLYRP3Q96LB9 341 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 S1PR3Q99500 378 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 P2RX4Q99571 388 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 SELENOIQ9C0D9 397 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 LINC00527Q9UJ94 153 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 ZNF580Q9UK33 172 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 LRRC42Q9Y546 428 aa11.39□□□□□ -0.59
SMARCE1-209ENST00000478349 TRAV8-7A0A075B6U6 113 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 TRBV5-7A0A0A0MS05 114 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 H0YHG0 523 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 CCL24O00175 119 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 LANCL1O43813 399 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 HBZP02008 142 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 MAS1P04201 325 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 CD1AP06126 327 aa11.38□□□□□ -0.59
SMARCE1-209ENST00000478349 CDX1P47902 265 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms