RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 NPIPB11E5RHQ5 1161 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 RP2O75695 350 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 HBZP02008 142 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 ECI1P42126 302 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 P2RX3P56373 397 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 IL13RA1P78552 427 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 LIN54Q6MZP7 749 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 CLEC18BQ6UXF7 455 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 TCTE3Q8IZS6 198 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 C1orf87Q8N0U7 546 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 C12orf45Q8N5I9 185 aaPredicted RBP12□□□□□ -0.49
COL4A6-206ENST00000477085 UXS1Q8NBZ7 420 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 OR2AK2Q8NG84 335 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 OR10J5Q8NHC4 309 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 LURAP1Q96LR2 239 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 PIPOXQ9P0Z9 390 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 MGAT4AQ9UM21 535 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 TANC2Q9HCD6 1990 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 TMPRSS2O15393 492 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 SIX6O95475 246 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 CGB3P0DN86 165 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 CGB7P0DN87 165 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 VAMP1P23763 118 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 NKX2-5P52952 324 aaPredicted RBP12□□□□□ -0.49
COL4A6-206ENST00000477085 H2BFSP57053 126 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 HFEQ30201 348 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 PHLDA2Q53GA4 152 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 TCF23Q7RTU1 214 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 SPICQ8N5J4 248 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 OR52L2PQ8NGH6 319 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 RFESDQ8TAC1 157 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 CASTOR1Q8WTX7 329 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 MITD1Q8WV92 249 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 TMEM246Q9BRR3 403 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 UBTD1Q9HAC8 227 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 MGAT4CQ9UBM8 478 aa12□□□□□ -0.49
COL4A6-206ENST00000477085 SFT2D2O95562 160 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 IGLV2-14P01704 120 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 EDDM3BP56851 147 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 PIGPP57054 158 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 TAS2R31P59538 309 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 GNMTQ14749 295 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 SLC9A3R2Q15599 337 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 ANKRD55Q3KP44 614 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 DCAF12L2Q5VW00 463 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 NLRC3Q7RTR2 1065 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 OR5D13Q8NGL4 314 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 PPP1R35Q8TAP8 253 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 ZFAND1Q8TCF1 268 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 GPHA2Q96T91 129 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 ZNF436Q9C0F3 470 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-206ENST00000477085 FAM234AQ9H0X4 552 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 KCNIP1Q9NZI2 227 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 CTSZQ9UBR2 303 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 C14orf166Q9Y224 244 aaKnown RBP11.99□□□□□ -0.49
COL4A6-206ENST00000477085 OR2W1Q9Y3N9 320 aa11.99□□□□□ -0.49
COL4A6-206ENST00000477085 KLF2Q9Y5W3 355 aaPredicted RBP11.99□□□□□ -0.49
COL4A6-206ENST00000477085 FAM172BPA6NC97 362 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 CRYM-AS1A6NIL9 109 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 G3V3Q6 166 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 DUS4LO95620 317 aaKnown RBP11.98□□□□□ -0.49
COL4A6-206ENST00000477085 DIRAS3O95661 229 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 ERP29P30040 261 aaKnown RBP11.98□□□□□ -0.49
COL4A6-206ENST00000477085 CEACAM6P40199 344 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 HERV-K104P61576 105 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 Q5BKY6 102 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 LY6G6FQ5SQ64 297 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 UTF1Q5T230 341 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 ZNF818PQ6ZRF7 136 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 SLC38A6Q8IZM9 456 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 SECTM1Q8WVN6 248 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 ARL11Q969Q4 196 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 GALMQ96C23 342 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 RAB1BQ9H0U4 201 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 CCL28Q9NRJ3 127 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 SLC2A9Q9NRM0 540 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 RDH8Q9NYR8 311 aa11.98□□□□□ -0.49
COL4A6-206ENST00000477085 DBX1A6NMT0 343 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 GOSR2O14653 212 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 NDUFS7O75251 213 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 CD34P28906 385 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 CDKN1AP38936 164 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 C17orf58Q2M2W7 97 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 C6orf183Q5T699 404 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 CHIAQ9BZP6 476 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 DNTTIP1Q9H147 329 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 NCOR1P1Q9H4R4 102 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 DLL4Q9NR61 685 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 HSD17B6O14756 317 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 SLC22A5O76082 557 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 OR2A4O95047 310 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 CLDN1O95832 211 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 GZMHP20718 246 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 KCNJ8Q15842 424 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 RTN4IP1Q8WWV3 396 aaPredicted RBP11.97□□□□□ -0.49
COL4A6-206ENST00000477085 C14orf79Q96F83 325 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 OR2A7Q96R45 310 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 SPOCK3Q9BQ16 436 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 SLC5A7Q9GZV3 580 aa11.97□□□□□ -0.49
COL4A6-206ENST00000477085 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms