RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 GFOD1Q9NXC2 390 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 TRAPPC2LQ9UL33 140 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 BLOC1S6Q9UL45 172 aa16.92■□□□□ 0.3
LIME1-204ENST00000476183 A0A1W2PPI3 338 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 FAM90A9PA6NNJ1 464 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 SDCBPO00560 298 aaPredicted RBP16.91■□□□□ 0.3
LIME1-204ENST00000476183 TSPAN15O95858 294 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 RCC1P18754 421 aaPredicted RBP16.91■□□□□ 0.3
LIME1-204ENST00000476183 PSMA1P25786 263 aaKnown RBP16.91■□□□□ 0.3
LIME1-204ENST00000476183 MNDAP41218 407 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 RPS27AP62979 156 aaKnown RBP16.91■□□□□ 0.3
LIME1-204ENST00000476183 MADCAM1Q13477 382 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 SSX1Q16384 188 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 Q6ZTK2 550 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 ZNF367Q7RTV3 350 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 C16orf82Q7Z2V1 217 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 DTX3Q8N9I9 347 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 OR1L1Q8NH94 360 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 WIPF2Q8TF74 440 aaPredicted RBP16.91■□□□□ 0.3
LIME1-204ENST00000476183 RBM14Q96PK6 669 aaKnown RBP16.91■□□□□ 0.3
LIME1-204ENST00000476183 SLC25A33Q9BSK2 321 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 LIN7BQ9HAP6 207 aa16.91■□□□□ 0.3
LIME1-204ENST00000476183 AK6Q9Y3D8 172 aaKnown RBP16.91■□□□□ 0.3
LIME1-204ENST00000476183 TMEM14DPA8MWL7 114 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 CA11O75493 328 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 OR2F2O95006 317 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 CHATP28329 748 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 P2RY14Q15391 338 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 NKAPLQ5M9Q1 402 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 C5orf24Q7Z6I8 188 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 LINC00311Q8N616 119 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 DRAM1Q8N682 238 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 OR6M1Q8NGM8 313 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 OR10X1Q8NGY0 326 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 OR56B4Q8NH76 319 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 MRPL30Q8TCC3 161 aaKnown RBP16.9■□□□□ 0.3
LIME1-204ENST00000476183 CAPSLQ8WWF8 208 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 SULT4A1Q9BR01 284 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 OCSTAMPQ9BR26 566 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 NICN1Q9BSH3 213 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 TMEM59Q9BXS4 323 aa16.9■□□□□ 0.3
LIME1-204ENST00000476183 A0A0A6YYD4 124 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 SLC31A2O15432 143 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 BPNT1O95861 308 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 HBZP02008 142 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 AMY1AP04745 511 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 AMY2AP04746 511 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 CALRP27797 417 aaKnown RBP16.89■□□□□ 0.29
LIME1-204ENST00000476183 EMX1Q04741 257 aaPredicted RBP16.89■□□□□ 0.29
LIME1-204ENST00000476183 C6orf183Q5T699 404 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 KCNG3Q8TAE7 436 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 TM2D1Q9BX74 207 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 WNT10AQ9GZT5 417 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 MMP27Q9H306 513 aa16.89■□□□□ 0.29
LIME1-204ENST00000476183 MBNL3Q9NUK0 354 aaKnown RBP16.89■□□□□ 0.29
LIME1-204ENST00000476183 SH2D7A6NKC9 451 aaPredicted RBP16.88■□□□□ 0.29
LIME1-204ENST00000476183 H3BUI4 141 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 SLC17A2O00624 439 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 SPINT2O43291 252 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 DENRO43583 198 aaKnown RBP16.88■□□□□ 0.29
LIME1-204ENST00000476183 ARL6IP5O75915 188 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 SNRNP70P08621 437 aaKnown RBP16.88■□□□□ 0.29
LIME1-204ENST00000476183 GABARAPL2P60520 117 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 C6orf201Q7Z4U5 140 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 THNSL2Q86YJ6 484 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 PRR18Q8N4B5 295 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 C8orf31Q8N9H6 132 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 ZNF439Q8NDP4 499 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 NEDD4LQ96PU5 975 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 FAAP24Q9BTP7 215 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 TAF9BQ9HBM6 251 aa16.88■□□□□ 0.29
LIME1-204ENST00000476183 HSD17B6O14756 317 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 FAM106CPP0CH98 169 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 CD28P10747 220 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 VDAC2P45880 294 aaPredicted RBP16.87■□□□□ 0.29
LIME1-204ENST00000476183 REG1BP48304 166 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 RAB7AP51149 207 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 ZNF134P52741 427 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 ZNF816Q0VGE8 651 aaPredicted RBP16.87■□□□□ 0.29
LIME1-204ENST00000476183 C2orf68Q2NKX9 166 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 ABCA11PQ4W5N1 156 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 OR8H3Q8N146 312 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 OR10V1Q8NGI7 309 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 AKR1E2Q96JD6 320 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 LPAR5Q9H1C0 372 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 PLGRKTQ9HBL7 147 aa16.87■□□□□ 0.29
LIME1-204ENST00000476183 ARSBP15848 533 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 CLDN12P56749 244 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 RAB11BQ15907 218 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 Q3ZCU0 254 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 ARSJQ5FYB0 599 aaPredicted RBP16.86■□□□□ 0.29
LIME1-204ENST00000476183 TRAT1Q6PIZ9 186 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 Q6ZPA2 131 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 FAM110DQ8TAY7 271 aaPredicted RBP16.86■□□□□ 0.29
LIME1-204ENST00000476183 ST6GALNAC6Q969X2 333 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 NDUFB11Q9NX14 153 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 GNG12Q9UBI6 72 aa16.86■□□□□ 0.29
LIME1-204ENST00000476183 IGHV1-3A0A0C4DH29 117 aa16.85■□□□□ 0.29
LIME1-204ENST00000476183 SHISA3A0PJX4 238 aa16.85■□□□□ 0.29
LIME1-204ENST00000476183 CCRL2O00421 344 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms