RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 RPH3AQ9Y2J0 694 aaPredicted RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 RBMX2Q9Y388 322 aaKnown RBP1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF175Q9Y473 711 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 PCDHGA1Q9Y5H4 931 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ALG5Q9Y673 324 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 R4GMQ9 66 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 ATRQ13535 2644 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 NBEAL1Q6ZS30 2694 aa1.1□□□□□ -2.23
CCDC39-203ENST00000473854 IGKV1-27A0A075B6S5 117 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV6A0A075B6T7 132 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 A0A087WZY1 265 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 IGKV1-9A0A0C4DH69 117 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 C7orf66A4D0T2 115 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 OR5H15A6NDH6 313 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 OR6C6A6NF89 314 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FABP12A6NFH5 140 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 A6NIZ1 184 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ARGFXA6NJG6 315 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM212A6NML5 194 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 IFITM5A6NNB3 132 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FAM166BA8MTA8 275 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FOXI3A8MTJ6 420 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 C21orf140B9A014 251 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF878C9JN71 531 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 NPIPA3F8WFD2 350 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GABARAPH6UMI1 98 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SLC17A2O00624 439 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 XKRYO14609 159 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GPR171O14626 319 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TP53I11O14683 189 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PHYHO14832 338 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CTDSPLO15194 276 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 RER1O15258 196 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 RGS5O15539 181 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 LYRM1O43325 122 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TNFSF12O43508 249 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GSTZ1O43708 216 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 OR2T1O43869 369 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CXCL13O43927 109 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SSX5O60225 188 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 NME2P1O60361 137 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SLC19A2O60779 497 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 PFDN1O60925 122 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ATP6V1G1O75348 118 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 RAD51DO75771 328 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GATBO75879 557 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 AQP8O94778 261 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TNFSF15O95150 251 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 UBL3O95164 117 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 OR6A2O95222 327 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TGM6O95932 706 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SERPINA3P01011 423 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 IGHV3-9P01782 118 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 IGHG1P01857 330 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 APOA1P02647 267 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 MT-ND4P03905 459 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 MAS1P04201 325 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 RLN1P04808 185 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ALDOBP05062 364 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ISG15P05161 165 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SERPINA7P05543 415 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 KRT8P05787 483 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 HPNP05981 417 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 FCER2P06734 321 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 MMP7P09237 267 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CD3GP09693 182 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF806P0C7X5 589 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 UBCP0CG48 685 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TRAPPC2P0DI81 140 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TRAPPC2BP0DI82 140 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CD37P11049 281 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 LIPCP11150 499 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 NR2C1P13056 603 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 B4GALT1P15291 398 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ABOP16442 354 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF708P17019 499 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SRMP19623 302 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CXCL3P19876 107 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 TCN2P20062 427 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 MSR1P21757 451 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CCL1P22362 96 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CRYGSP22914 178 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CDK2P24941 298 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ACKR3P25106 362 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 GDF1P27539 372 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 LAP3P28838 519 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CRABP1P29762 137 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 SLC6A1P30531 599 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 OTX1P32242 354 aaPredicted RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 S100A5P33763 92 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 RCVRNP35243 200 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 ATP6V1E1P36543 226 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 EIF1P41567 113 aaKnown RBP1.09□□□□□ -2.23
CCDC39-203ENST00000473854 MAGEA5P43359 124 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 OR3A4PP47883 348 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CSNK1A1P48729 337 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 CX3CR1P49238 355 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 POU3F4P49335 361 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 STARP49675 285 aa1.09□□□□□ -2.23
CCDC39-203ENST00000473854 EIF2B2P49770 351 aaKnown RBP1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms