RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 LEUTXA8MZ59 168 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 F2RL2O00254 374 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 SDCBPO00560 298 aaPredicted RBP15.22■□□□□ 0.03
PTCD3-210ENST00000473829 LDLRAD4O15165 306 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 SOCS1O15524 211 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 CA11O75493 328 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 IGHV3-43DP0DP04 118 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 MYL9P24844 172 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 CD24P25063 80 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 LOXL3P58215 753 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 KRTAP10-3P60369 221 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 NEDD8Q15843 81 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 NEDD4LQ96PU5 975 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 MBNL3Q9NUK0 354 aaKnown RBP15.22■□□□□ 0.03
PTCD3-210ENST00000473829 TXNL4BQ9NX01 149 aaKnown RBP15.22■□□□□ 0.03
PTCD3-210ENST00000473829 STEAP1Q9UHE8 339 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 STUB1Q9UNE7 303 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 RNF114Q9Y508 228 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 FBN3Q75N90 2809 aa15.22■□□□□ 0.03
PTCD3-210ENST00000473829 FOXI3A8MTJ6 420 aaPredicted RBP15.21■□□□□ 0.03
PTCD3-210ENST00000473829 HBZP02008 142 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 BLVRBP30043 206 aaPredicted RBP15.21■□□□□ 0.03
PTCD3-210ENST00000473829 FGF9P31371 208 aaPredicted RBP15.21■□□□□ 0.03
PTCD3-210ENST00000473829 PROK1P58294 105 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 DIAPH2-AS1Q14236 149 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 C2orf76Q3KRA6 126 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 SHISA2Q6UWI4 295 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 LIAT1Q6ZQX7 453 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 PRR18Q8N4B5 295 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 FAM89BQ8N5H3 189 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 OR1L1Q8NH94 360 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 OR51E2Q9H255 320 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 GFOD1Q9NXC2 390 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 FBLN5Q9UBX5 448 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 SIGLEC9Q9Y336 463 aa15.21■□□□□ 0.03
PTCD3-210ENST00000473829 A0A0B4J203 849 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 TMEM272A0A1B0GTI8 110 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 IFITM5A6NNB3 132 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 H3BUI4 141 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 PDCD5O14737 125 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 RAB3BP20337 219 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 CEACAM3P40198 252 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 PSMD7P51665 324 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 C6orf183Q5T699 404 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 SLC16A12Q6ZSM3 486 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 OR52M1Q8NGK5 317 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 URM1Q9BTM9 101 aaKnown RBP15.2■□□□□ 0.02
PTCD3-210ENST00000473829 TAF9BQ9HBM6 251 aa15.2■□□□□ 0.02
PTCD3-210ENST00000473829 SLC31A2O15432 143 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 EFNB2P52799 333 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 TMEM50BP56557 158 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 OR10V1Q8NGI7 309 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 TOMM40LQ969M1 308 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 CREB3L1Q96BA8 519 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 HDHD3Q9BSH5 251 aaPredicted RBP15.19■□□□□ 0.02
PTCD3-210ENST00000473829 RNF167Q9H6Y7 350 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 RAB18Q9NP72 206 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 AMMECR1Q9Y4X0 333 aaPredicted RBP15.19■□□□□ 0.02
PTCD3-210ENST00000473829 TRRAPQ9Y4A5 3859 aa15.19■□□□□ 0.02
PTCD3-210ENST00000473829 A0A1W2PPI3 338 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 SPINT2O43291 252 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 NAPSAO96009 420 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 GADD45AP24522 165 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 VEGFCP49767 419 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 GNMTQ14749 295 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 TRAT1Q6PIZ9 186 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 ZNF439Q8NDP4 499 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 OR4C13Q8NGP0 309 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 RPEQ96AT9 228 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 RANBP3Q9H6Z4 567 aaPredicted RBP15.18■□□□□ 0.02
PTCD3-210ENST00000473829 ZNF702PQ9H963 129 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 LIN7BQ9HAP6 207 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 PLEKHJ1Q9NW61 149 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 AK3Q9UIJ7 227 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 PITPNC1Q9UKF7 332 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 SSR3Q9UNL2 185 aa15.18■□□□□ 0.02
PTCD3-210ENST00000473829 OOSP1A8MZH6 123 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 TIMM23O14925 209 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 SLC2A2P11168 524 aaPredicted RBP15.17■□□□□ 0.02
PTCD3-210ENST00000473829 KIR2DS4P43632 304 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 MADCAM1Q13477 382 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 HABP2Q14520 560 aaPredicted RBP15.17■□□□□ 0.02
PTCD3-210ENST00000473829 HMGN3Q15651 99 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 PLAC9Q5JTB6 97 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 OR10X1Q8NGY0 326 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 CFHR4Q92496 578 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 ARHGAP5-AS1Q96IT6 56 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 CITED1Q99966 193 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 CHCHD6Q9BRQ6 235 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 NPFFR1Q9GZQ6 430 aa15.17■□□□□ 0.02
PTCD3-210ENST00000473829 TNFAIP8O95379 198 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 CD36P16671 472 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 BRS3P32247 399 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 ZNF134P52741 427 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 MOGAT2Q3SYC2 334 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 CCDC144NLQ6NUI1 221 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 ZNF880Q6PDB4 577 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 Q6ZS46 218 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 ZNF554Q86TJ5 538 aa15.16■□□□□ 0.02
PTCD3-210ENST00000473829 LINC00311Q8N616 119 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms