RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 C12orf77C9JDV5 145 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 NAPSAO96009 420 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 HKR1P10072 659 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
SDC3-203ENST00000471567 CEACAM3P40198 252 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 DYNLT3P51808 116 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 EFNB2P52799 333 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 SCAND1P57086 179 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 MXD1Q05195 221 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 PLA2G7Q13093 441 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 SSX2Q16385 188 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 HLA-DRB5Q30154 266 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 Q3ZCU0 254 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 DYNAPQ8N1N2 210 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 GCDHQ92947 438 aaPredicted RBP12.37□□□□□ -0.43
SDC3-203ENST00000471567 PECRQ9BY49 303 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 MRPS26Q9BYN8 205 aaKnown RBP12.37□□□□□ -0.43
SDC3-203ENST00000471567 DAPK2Q9UIK4 370 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 VPREB3Q9UKI3 123 aa12.37□□□□□ -0.43
SDC3-203ENST00000471567 A0A0B4J203 849 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 FAM172BPA6NC97 362 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 FAM181BA6NEQ2 426 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 BUB1B-PAK6H3BSN5 160 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 H3BUX3 64 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 J3QR06 171 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 SDCBPO00560 298 aaPredicted RBP12.36□□□□□ -0.43
SDC3-203ENST00000471567 HBZP02008 142 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 CRYBA1P05813 215 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 CLEC2LP0C7M8 214 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 COMPP49747 757 aaPredicted RBP12.36□□□□□ -0.43
SDC3-203ENST00000471567 LOXL3P58215 753 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 LTC4SQ16873 150 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 ZNF880Q6PDB4 577 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 MOB1BQ7L9L4 216 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 CROCCP3Q8IVE0 287 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 C8orf31Q8N9H6 132 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 OR10R2Q8NGX6 335 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 RAB3CQ96E17 227 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 ARHGAP5-AS1Q96IT6 56 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 CYYR1Q96J86 154 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 FUNDC2Q9BWH2 189 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 MMP28Q9H239 520 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 TAF9BQ9HBM6 251 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 GFOD1Q9NXC2 390 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 PSG11Q9UQ72 335 aa12.36□□□□□ -0.43
SDC3-203ENST00000471567 AMMECR1Q9Y4X0 333 aaPredicted RBP12.36□□□□□ -0.43
SDC3-203ENST00000471567 OOSP1A8MZH6 123 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 LY6LH3BQJ8 138 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 RAB27BO00194 218 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 GPR137BO60478 399 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 FOXL1Q12952 345 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 ARL6IP1Q15041 203 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 PLAC9Q5JTB6 97 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 UTF1Q5T230 341 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 LINC00311Q8N616 119 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 PIFOQ8TCI5 191 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 CHMP1AQ9HD42 196 aaPredicted RBP12.35□□□□□ -0.43
SDC3-203ENST00000471567 ABCB10Q9NRK6 738 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 AK3Q9UIJ7 227 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 MGAT4AQ9UM21 535 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 HILPDAQ9Y5L2 63 aa12.35□□□□□ -0.43
SDC3-203ENST00000471567 SCGNO76038 276 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 SNRPBP14678 240 aaKnown RBP12.34□□□□□ -0.43
SDC3-203ENST00000471567 PAX6P26367 422 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 HTD2P86397 168 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 HMGN3Q15651 99 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 IDNKQ5T6J7 187 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 TPTE2P1Q5T6R2 138 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 LIAT1Q6ZQX7 453 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 OR1L1Q8NH94 360 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 UBALD1Q8TB05 177 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 LEAP2Q969E1 77 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 CMSS1Q9BQ75 279 aaKnown RBP12.34□□□□□ -0.43
SDC3-203ENST00000471567 ATG5Q9H1Y0 275 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 C12orf4Q9NQ89 552 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 ABRACLQ9P1F3 81 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 GNG12Q9UBI6 72 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 ETV7Q9Y603 341 aa12.34□□□□□ -0.43
SDC3-203ENST00000471567 SERPINE3A8MV23 424 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 NDUFA7O95182 113 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 IGHV3-7P01780 117 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 RPS19P39019 145 aaKnown RBP12.33□□□□□ -0.44
SDC3-203ENST00000471567 ALDH3B2P48448 385 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 GNG10P50151 68 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.44
SDC3-203ENST00000471567 MADCAM1Q13477 382 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 STEAP3Q658P3 488 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 CCDC144NLQ6NUI1 221 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 ANKRD13BQ86YJ7 626 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 PRR18Q8N4B5 295 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 LGALS14Q8TCE9 139 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 GALMQ96C23 342 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 OCSTAMPQ9BR26 566 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 RAB18Q9NP72 206 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 OR2S2Q9NQN1 319 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 C1RLQ9NZP8 487 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 JPT1Q9UK76 154 aa12.33□□□□□ -0.44
SDC3-203ENST00000471567 KCNK7Q9Y2U2 307 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms