RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 IGKV3-15P01624 115 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 PRB2P02812 416 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 ADRA2AP08913 450 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 LINC00032P0C843 101 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 CECR9P0C854 216 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 HPGDP15428 266 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 TAC1P20366 129 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 GABRR1P24046 479 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 COX7A1P24310 79 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 DCKP27707 260 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 PHBP35232 272 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 NAA10P41227 235 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 APOC4P55056 127 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 KRTAP10-12P60413 245 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 BAMBIQ13145 260 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 ARFRP1Q13795 201 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 ZNF141Q15928 474 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 IMPG1Q17R60 797 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 VAX1Q5SQQ9 334 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 AP1ARQ63HQ0 302 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 STUMQ69YW2 141 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 REEP3Q6NUK4 255 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 C3orf33Q6P1S2 294 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 CASP12Q6UXS9 341 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 C19orf35Q6ZS72 473 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 APRG1Q8IVJ8 170 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 RIMKLAQ8IXN7 391 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 RIBC1Q8N443 379 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 KRTCAP2Q8N6L1 136 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 OR4M2Q8NGB6 313 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 OR4F15Q8NGB8 312 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 OR5AK3PQ8NH89 298 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 ACOT11Q8WXI4 607 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 YIPF5Q969M3 257 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 PPCDCQ96CD2 204 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 ASB9Q96DX5 294 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 OPALINQ96PE5 141 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 OR7D2Q96RA2 312 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 SH3GL1Q99961 368 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 KCTD14Q9BQ13 255 aaPredicted RBP3.94□□□□□ -1.78
CKS1B-204ENST00000471245 RNF167Q9H6Y7 350 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 ZNF442Q9H7R0 627 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 ACER3Q9NUN7 267 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 C1orf109Q9NX04 203 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 PTTG3PQ9NZH4 202 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 KIF25-AS1Q9Y6Z4 181 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 SACSQ9NZJ4 4579 aa3.94□□□□□ -1.78
CKS1B-204ENST00000471245 A0A0J9YXY3 114 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 EXOC1LA0A1B0GW35 172 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 ZNF99A8MXY4 864 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-204ENST00000471245 HSBP1L1C9JCN9 74 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 CLDN34H7C241 214 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 GPR171O14626 319 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 RAB29O14966 203 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 PLIN3O60664 434 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 RP2O75695 350 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 IGHV2-5P01817 119 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 MYL2P10916 166 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 TCN1P20061 433 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-204ENST00000471245 TFPI2P48307 235 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 TMEM33P57088 247 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 TAS2R19P59542 299 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 DNAJB13P59910 316 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 KRTAP10-3P60369 221 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 RPL38P63173 70 aaKnown RBP3.93□□□□□ -1.78
CKS1B-204ENST00000471245 HBA1P69905 142 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 TGFBR3Q03167 851 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 SLC9A3R2Q15599 337 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 OR52W1Q6IF63 320 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 C1orf94Q6P1W5 598 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 RNF165Q6ZSG1 346 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 HDDC2Q7Z4H3 204 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 WDFY1Q8IWB7 410 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 CLECL1Q8IZS7 167 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 PIGXQ8TBF5 258 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 RDH5Q92781 318 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 CHMP6Q96FZ7 201 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 SORT1Q99523 831 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 RSPO3Q9BXY4 272 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-204ENST00000471245 CCNB1IP1Q9NPC3 277 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 RRAGDQ9NQL2 400 aaPredicted RBP3.93□□□□□ -1.78
CKS1B-204ENST00000471245 PRR34Q9NV39 138 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 FIS1Q9Y3D6 152 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 DNAJC15Q9Y5T4 150 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 SMAD5-AS1Q9Y6J3 95 aa3.93□□□□□ -1.78
CKS1B-204ENST00000471245 TMED7-TICAM2A0A0A6YYA0 188 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 IGHV2OR16-5A0A0B4J2B6 119 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 TMEM72A0PK05 275 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 PSMB11A5LHX3 300 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 H3BNH8 94 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 M0R233 179 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 AZIN1O14977 448 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 SCN2BO60939 215 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 ZBTB25P24278 435 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 VDAC2P45880 294 aaPredicted RBP3.92□□□□□ -1.78
CKS1B-204ENST00000471245 CX3CR1P49238 355 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 OR2B6P58173 313 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 ARHGAP11BQ3KRB8 267 aa3.92□□□□□ -1.78
CKS1B-204ENST00000471245 AVPI1Q5T686 147 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms