RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 EFNB2P52799 333 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 P2RY14Q15391 338 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 C6orf183Q5T699 404 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 CCDC144NLQ6NUI1 221 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 Q8N2B8 174 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 FAM89BQ8N5H3 189 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 C8orf31Q8N9H6 132 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 OR4K15Q8NH41 348 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 FCGR1BQ92637 280 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 NEDD4LQ96PU5 975 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 NICN1Q9BSH3 213 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 PLGRKTQ9HBL7 147 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 MBNL3Q9NUK0 354 aaKnown RBP11.35□□□□□ -0.59
TOP3B-215ENST00000470338 GFOD1Q9NXC2 390 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 SIGLEC9Q9Y336 463 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 V9GY05 133 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 VWFP04275 2813 aa11.35□□□□□ -0.59
TOP3B-215ENST00000470338 SDCBPO00560 298 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-215ENST00000470338 SPINT2O43291 252 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 RCC1P18754 421 aaPredicted RBP11.34□□□□□ -0.59
TOP3B-215ENST00000470338 MADCAM1Q13477 382 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 RAB11BQ15907 218 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 TMEM30BQ3MIR4 351 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 Q3ZCU0 254 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 C11orf88Q6PI97 169 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 ZNF773Q6PK81 442 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 ZNF554Q86TJ5 538 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 OR2T6Q8NHC8 308 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 UBALD1Q8TB05 177 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 MRPL30Q8TCC3 161 aaKnown RBP11.34□□□□□ -0.59
TOP3B-215ENST00000470338 SULT4A1Q9BR01 284 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 FAAP24Q9BTP7 215 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 LPAR5Q9H1C0 372 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 ZNF702PQ9H963 129 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 RAB9BQ9NP90 201 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 MGAM2Q2M2H8 2515 aa11.34□□□□□ -0.59
TOP3B-215ENST00000470338 CMYA5Q8N3K9 4069 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 A0A0A6YYD4 124 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 SHISA3A0PJX4 238 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 FAM90A9PA6NNJ1 464 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 PDCD5O14737 125 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 LDLRAD4O15165 306 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 HBZP02008 142 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 CD24P25063 80 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 BLVRBP30043 206 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-215ENST00000470338 MNDAP41218 407 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 RANBP1P43487 201 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 GNG10P50151 68 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 C2orf76Q3KRA6 126 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 NKAPLQ5M9Q1 402 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 C16orf82Q7Z2V1 217 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 C6orf201Q7Z4U5 140 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 OR51D1Q8NGF3 324 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 TOMM40LQ969M1 308 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 RPEQ96AT9 228 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 FAM3DQ96BQ1 224 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 URM1Q9BTM9 101 aaKnown RBP11.33□□□□□ -0.6
TOP3B-215ENST00000470338 PRSS22Q9GZN4 317 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 LIN7BQ9HAP6 207 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 TAF9BQ9HBM6 251 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 WNK1Q9H4A3 2382 aa11.33□□□□□ -0.6
TOP3B-215ENST00000470338 TET2Q6N021 2002 aaPredicted RBP11.33□□□□□ -0.6
TOP3B-215ENST00000470338 IGHV3-43A0A0B4J1X8 118 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 A0A1W2PPE3 182 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 A0A1W2PPI3 338 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 FOXI3A8MTJ6 420 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-215ENST00000470338 IGHV3-43DP0DP04 118 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 PSMB9P28065 219 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 FGF9P31371 208 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-215ENST00000470338 RAB7AP51149 207 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 CLDN12P56749 244 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 BLCAPP62952 87 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 DIAPH2-AS1Q14236 149 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 FBLN7Q53RD9 439 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 FAM53AQ6NSI3 398 aaPredicted RBP11.32□□□□□ -0.6
TOP3B-215ENST00000470338 ZNF439Q8NDP4 499 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 OR10X1Q8NGY0 326 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 OR1L1Q8NH94 360 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 CFHR4Q92496 578 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
TOP3B-215ENST00000470338 SERTAD4Q9NUC0 356 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 PLEKHJ1Q9NW61 149 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 KCNIP1Q9NZI2 227 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 STEAP1Q9UHE8 339 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 HSF4Q9ULV5 492 aa11.32□□□□□ -0.6
TOP3B-215ENST00000470338 TIMM23O14925 209 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 SOCS1O15524 211 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 OR2F2O95006 317 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 NAPSAO96009 420 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 MYL9P24844 172 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 ZNF134P52741 427 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 TMEM50BP56557 158 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 ZNF816Q0VGE8 651 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-215ENST00000470338 HABP2Q14520 560 aaPredicted RBP11.31□□□□□ -0.6
TOP3B-215ENST00000470338 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
TOP3B-215ENST00000470338 HES5Q5TA89 166 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms