RNA–Protein interactions for RNA: ENST00000466684.5

BRD9-201, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 1,417 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-201ENST00000466684 ZNF260Q3ZCT1 412 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 ASCL4Q6XD76 172 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 LHFPL3Q86UP9 236 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 APH1BQ8WW43 257 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 RTN4IP1Q8WWV3 396 aaPredicted RBP12.72□□□□□ -0.37
BRD9-201ENST00000466684 ARL11Q969Q4 196 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 LGALS12Q96DT0 336 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 AMBNQ9NP70 447 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 ST3GAL6Q9Y274 331 aa12.72□□□□□ -0.37
BRD9-201ENST00000466684 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.37
BRD9-201ENST00000466684 OR7C1O76099 320 aaPredicted RBP12.71□□□□□ -0.37
BRD9-201ENST00000466684 SOX6P35712 828 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 CFHR3Q02985 330 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 FHL3Q13643 280 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 SMN1Q16637 294 aaKnown RBP12.71□□□□□ -0.37
BRD9-201ENST00000466684 Q3ZCU0 254 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 NHLRC3Q5JS37 347 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 ZNF529Q6P280 563 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 OR11H1Q8NG94 326 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 ST6GALNAC6Q969X2 333 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 PDCD1LG2Q9BQ51 273 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 ISG20L2Q9H9L3 353 aaKnown RBP12.71□□□□□ -0.37
BRD9-201ENST00000466684 GFOD1Q9NXC2 390 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 ZNF580Q9UK33 172 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 SMAD5-AS1Q9Y6J3 95 aa12.71□□□□□ -0.37
BRD9-201ENST00000466684 IRGMA1A4Y4 181 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 C15orf65H3BRN8 121 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 ORC5O43913 435 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 CSTBP04080 98 aaKnown RBP12.71□□□□□ -0.38
BRD9-201ENST00000466684 IGF1P05019 195 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 PSMB8P28062 276 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 MED21Q13503 144 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 LINC00596Q86U02 117 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 FAM71E2Q8N5Q1 922 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 BPIFB6Q8NFQ5 453 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 OR51A2Q8NGJ7 313 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 OR52N1Q8NH53 320 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 MUC7Q8TAX7 377 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 HSPB9Q9BQS6 159 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 CHCHD6Q9BRQ6 235 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 METTL9Q9H1A3 318 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 SCN3BQ9NY72 215 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 IL36GQ9NZH8 169 aa12.71□□□□□ -0.38
BRD9-201ENST00000466684 DENRO43583 198 aaKnown RBP12.7□□□□□ -0.38
BRD9-201ENST00000466684 LY86O95711 162 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 FADS2O95864 444 aaKnown RBP12.7□□□□□ -0.38
BRD9-201ENST00000466684 CD2P06729 351 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 OR8U8P0C7N1 319 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 GBX2P52951 348 aaPredicted RBP12.7□□□□□ -0.38
BRD9-201ENST00000466684 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
BRD9-201ENST00000466684 RAB40BQ12829 278 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 FBLIM1Q8WUP2 373 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 KCTD7Q96MP8 289 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 S100A13Q99584 98 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 JAM3Q9BX67 310 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 RAB9BQ9NP90 201 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 PAK1IP1Q9NWT1 392 aaPredicted RBP12.7□□□□□ -0.38
BRD9-201ENST00000466684 CHCHD3Q9NX63 227 aaKnown RBP12.7□□□□□ -0.38
BRD9-201ENST00000466684 ZNF581Q9P0T4 197 aa12.7□□□□□ -0.38
BRD9-201ENST00000466684 E9PI62 339 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 CDRT1O95170 752 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 MPV17LQ2QL34 196 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 C6orf141Q5SZD1 244 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 ATAD3CQ5T2N8 411 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 CASC10Q5T4H9 136 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 TMEM65Q6PI78 240 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 STX19Q8N4C7 294 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 NEK7Q8TDX7 302 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 CCDC107Q8WV48 283 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 UBE2E2Q96LR5 201 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 ERVK13-1Q9NX77 482 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 TAS2R4Q9NYW5 299 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 ZNF107Q9UII5 783 aaPredicted RBP12.69□□□□□ -0.38
BRD9-201ENST00000466684 ING4Q9UNL4 249 aa12.69□□□□□ -0.38
BRD9-201ENST00000466684 IGHV3-43A0A0B4J1X8 118 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 EFCAB10A6NFE3 127 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 ZNF736B4DX44 427 aaPredicted RBP12.68□□□□□ -0.38
BRD9-201ENST00000466684 AIPO00170 330 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 GEMIN2O14893 280 aaKnown RBP12.68□□□□□ -0.38
BRD9-201ENST00000466684 IGHV3-43DP0DP04 118 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 SOX2P48431 317 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 ZNF137PP52743 207 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 F2RL1P55085 397 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 TMEM30BQ3MIR4 351 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 FAM27D1Q5T7N8 215 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 SLC25A48Q6ZT89 311 aaKnown RBP12.68□□□□□ -0.38
BRD9-201ENST00000466684 OR1N2Q8NGR9 330 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 UBALD1Q8TB05 177 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 MYOZ3Q8TDC0 251 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 GPR148Q8TDV2 347 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 TMEM138Q9NPI0 162 aa12.68□□□□□ -0.38
BRD9-201ENST00000466684 MRPS18AQ9NVS2 196 aaKnown RBP12.68□□□□□ -0.38
BRD9-201ENST00000466684 SPINT2O43291 252 aa12.67□□□□□ -0.38
BRD9-201ENST00000466684 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
BRD9-201ENST00000466684 MT-ND4P03905 459 aa12.67□□□□□ -0.38
BRD9-201ENST00000466684 SERPINA2P20848 420 aa12.67□□□□□ -0.38
BRD9-201ENST00000466684 ZNF93P35789 620 aaPredicted RBP12.67□□□□□ -0.38
BRD9-201ENST00000466684 PPP3R1P63098 170 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms