RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 MOGAT2Q3SYC2 334 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 PLAC9Q5JTB6 97 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 UTF1Q5T230 341 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 C16orf87Q6PH81 154 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 ZNF554Q86TJ5 538 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 CROCCP3Q8IVE0 287 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 PRR18Q8N4B5 295 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 OR52M1Q8NGK5 317 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 OR4P4Q8NGL7 312 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 OR10R2Q8NGX6 335 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 NDNFQ8TB73 568 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 RAB3CQ96E17 227 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 SSX3Q99909 188 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 ATG5Q9H1Y0 275 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 TAF9BQ9HBM6 251 aa11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 CHMP1AQ9HD42 196 aaPredicted RBP11.76□□□□□ -0.53
SQSTM1-205ENST00000464493 BTBD17A6NE02 478 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 RAB27BO00194 218 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 SDCBPO00560 298 aaPredicted RBP11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 NAPSAO96009 420 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 IGHV3-7P01780 117 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 HBZP02008 142 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 SCAND1P57086 179 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 LOXL3P58215 753 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 NCS1P62166 190 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 AANATQ16613 207 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 GPR141Q7Z602 305 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 ANKRD13BQ86YJ7 626 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 DYNAPQ8N1N2 210 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 OR5R1Q8NH85 324 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 OR1L1Q8NH94 360 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 LGALS14Q8TCE9 139 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 CREB3L1Q96BA8 519 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 CHIAQ9BZP6 476 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 DPM3Q9P2X0 92 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 PSG11Q9UQ72 335 aa11.75□□□□□ -0.53
SQSTM1-205ENST00000464493 TRBV6-6A0A0A6YYG2 114 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 LEUTXA8MZ59 168 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 BUB1B-PAK6H3BSN5 160 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 J3QR06 171 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 GNB3P16520 340 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 SERPINB10P48595 397 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 VBP1P61758 197 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 LRRC75BQ2VPJ9 315 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 HLA-DRB5Q30154 266 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 TMEM30BQ3MIR4 351 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 GPR107Q5VW38 600 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 OLFML2AQ68BL7 652 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 ZNF880Q6PDB4 577 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 SETD6Q8TBK2 473 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 NAA50Q9GZZ1 169 aaKnown RBP11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 MMP28Q9H239 520 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 GFOD1Q9NXC2 390 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 ABRACLQ9P1F3 81 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 KCNK7Q9Y2U2 307 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 HILPDAQ9Y5L2 63 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
SQSTM1-205ENST00000464493 A0A075B6Q4 140 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 POM121CA8CG34 1229 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 VGLL3A8MV65 326 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 H3BUX3 64 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 GABARAPO95166 117 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 CEACAM3P40198 252 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 GNG10P50151 68 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 ACTG1P63261 375 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 PLA1AQ53H76 456 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 C5orf24Q7Z6I8 188 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 OR5H6Q8NGV6 325 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 SLC25A46Q96AG3 418 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 HDHD3Q9BSH5 251 aaPredicted RBP11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 C12orf4Q9NQ89 552 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 OR2S2Q9NQN1 319 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 RHBDL2Q9NX52 303 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 GNG12Q9UBI6 72 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 VPREB3Q9UKI3 123 aa11.73□□□□□ -0.53
SQSTM1-205ENST00000464493 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 SERPINE3A8MV23 424 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 LY6LH3BQJ8 138 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 MFNGO00587 321 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 SCGNO76038 276 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 CRYBA1P05813 215 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 CD3GP09693 182 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 HIST1H1DP16402 221 aaKnown RBP11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 RAB13P51153 203 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 MRPS15P82914 257 aaKnown RBP11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 HTD2P86397 168 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 ARL6IP1Q15041 203 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 HMGN3Q15651 99 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 CTF1Q16619 201 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 Q3ZCU0 254 aa11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 FAM53AQ6NSI3 398 aaPredicted RBP11.72□□□□□ -0.53
SQSTM1-205ENST00000464493 Q6ZPA2 131 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms