RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 UBALD1Q8TB05 177 aa12.46□□□□□ -0.41
RAB11FIP3-208ENST00000464263 PIFOQ8TCI5 191 aa12.46□□□□□ -0.41
RAB11FIP3-208ENST00000464263 ARHGAP5-AS1Q96IT6 56 aa12.46□□□□□ -0.41
RAB11FIP3-208ENST00000464263 SSX3Q99909 188 aa12.46□□□□□ -0.41
RAB11FIP3-208ENST00000464263 MRPS26Q9BYN8 205 aaKnown RBP12.46□□□□□ -0.41
RAB11FIP3-208ENST00000464263 AK3Q9UIJ7 227 aa12.46□□□□□ -0.41
RAB11FIP3-208ENST00000464263 PSG11Q9UQ72 335 aa12.46□□□□□ -0.41
RAB11FIP3-208ENST00000464263 VGLL3A8MV65 326 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 LY6LH3BQJ8 138 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 BUB1B-PAK6H3BSN5 160 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 J3QR06 171 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RAB27BO00194 218 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TOR1AO14656 332 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 IGHV3-7P01780 117 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 SNRPBP14678 240 aaKnown RBP12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RPS19P39019 145 aaKnown RBP12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 ALDH3B2P48448 385 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 FAM189A2Q15884 450 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 SSX2Q16385 188 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HLA-DRB5Q30154 266 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TRAT1Q6PIZ9 186 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 ZNF554Q86TJ5 538 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 OR9G1Q8NH87 305 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 LEAP2Q969E1 77 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TAF9BQ9HBM6 251 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 DPM3Q9P2X0 92 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 KCNK7Q9Y2U2 307 aa12.45□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TRBV6-6A0A0A6YYG2 114 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 FAM181BA6NEQ2 426 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 H3BUX3 64 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 SPINT2O43291 252 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HBZP02008 142 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HKR1P10072 659 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 LRRC75BQ2VPJ9 315 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 OLFML2AQ68BL7 652 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 OR10R2Q8NGX6 335 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 OR5R1Q8NH85 324 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 OR1L1Q8NH94 360 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 SPATA3Q8NHX4 192 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 NDNFQ8TB73 568 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HDHD3Q9BSH5 251 aaPredicted RBP12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 MMP28Q9H239 520 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RIMS4Q9H426 269 aaPredicted RBP12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RAB9BQ9NP90 201 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 GFOD1Q9NXC2 390 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 KCNIP1Q9NZI2 227 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HILPDAQ9Y5L2 63 aa12.44□□□□□ -0.42
RAB11FIP3-208ENST00000464263 METTL21EPA6NDL7 271 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 LEUTXA8MZ59 168 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TMEM127O75204 238 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RAB13P51153 203 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 SCAND1P57086 179 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HMGN3Q15651 99 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 IDNKQ5T6J7 187 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 ANKRD13BQ86YJ7 626 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 PRR18Q8N4B5 295 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 C8orf31Q8N9H6 132 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TAF15Q92804 592 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 GCDHQ92947 438 aaPredicted RBP12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 CREB3L1Q96BA8 519 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RAB3CQ96E17 227 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 ATG5Q9H1Y0 275 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 VPREB3Q9UKI3 123 aa12.43□□□□□ -0.42
RAB11FIP3-208ENST00000464263 IGHV3-43A0A0B4J1X8 118 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 BTBD17A6NE02 478 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 POM121CA8CG34 1229 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 MFNGO00587 321 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 GPR137BO60478 399 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 IGHV3-43DP0DP04 118 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 COMPP49747 757 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 DYNLT3P51808 116 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RPL15P61313 204 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 VBP1P61758 197 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 NCS1P62166 190 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 ACTG1P63261 375 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HTD2P86397 168 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TMEM30BQ3MIR4 351 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 Q3ZCU0 254 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 PLA1AQ53H76 456 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 CROCCP3Q8IVE0 287 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 LINC00311Q8N616 119 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 OR5H6Q8NGV6 325 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 LGALS14Q8TCE9 139 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 CMSS1Q9BQ75 279 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 NAA50Q9GZZ1 169 aaKnown RBP12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 CHMP1AQ9HD42 196 aaPredicted RBP12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 Q9N2K0 584 aa12.42□□□□□ -0.42
RAB11FIP3-208ENST00000464263 A0A1W2PPE3 182 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 HIST1H1DP16402 221 aaKnown RBP12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 GNB3P16520 340 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 CEACAM3P40198 252 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 GNG10P50151 68 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 RELBQ01201 579 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 CTF1Q16619 201 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 MORN2Q502X0 79 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 TPTE2P1Q5T6R2 138 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 GPR107Q5VW38 600 aa12.41□□□□□ -0.42
RAB11FIP3-208ENST00000464263 ZNF439Q8NDP4 499 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms