RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PLGRKTQ9HBL7 147 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 ACOT13Q9NPJ3 140 aa13.01□□□□□ -0.33
COL1A1-202ENST00000463440 PKD1L1Q8TDX9 2849 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 C12orf77C9JDV5 145 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 MRPS14O60783 128 aaKnown RBP13□□□□□ -0.33
COL1A1-202ENST00000463440 OR2F2O95006 317 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 BPNT1O95861 308 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 FAM106CPP0CH98 169 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 RANBP1P43487 201 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 GABARAPL2P60520 117 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 BLCAPP62952 87 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 RPS27AP62979 156 aaKnown RBP13□□□□□ -0.33
COL1A1-202ENST00000463440 FABP5Q01469 135 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 C2orf68Q2NKX9 166 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 NKAPLQ5M9Q1 402 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 OR10K2Q6IF99 312 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 OR8H3Q8N146 312 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 RBM14Q96PK6 669 aaKnown RBP13□□□□□ -0.33
COL1A1-202ENST00000463440 MMP27Q9H306 513 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 SERTAD4Q9NUC0 356 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 GFOD1Q9NXC2 390 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 KCNIP1Q9NZI2 227 aa13□□□□□ -0.33
COL1A1-202ENST00000463440 A0A1W2PPE3 182 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 M0QZK8 103 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 CALRP27797 417 aaKnown RBP12.99□□□□□ -0.33
COL1A1-202ENST00000463440 VDAC2P45880 294 aaPredicted RBP12.99□□□□□ -0.33
COL1A1-202ENST00000463440 LOXL3P58215 753 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 Q3ZCU0 254 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 THNSL2Q86YJ6 484 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 SVOPQ8N4V2 548 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 LINC00311Q8N616 119 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 C8orf31Q8N9H6 132 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 CFHR4Q92496 578 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 OCSTAMPQ9BR26 566 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 TM2D1Q9BX74 207 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 GNG12Q9UBI6 72 aa12.99□□□□□ -0.33
COL1A1-202ENST00000463440 AK6Q9Y3D8 172 aaKnown RBP12.99□□□□□ -0.33
COL1A1-202ENST00000463440 TET2Q6N021 2002 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-202ENST00000463440 IGHV3-43A0A0B4J1X8 118 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 A0A1W2PPI3 338 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 FAM90A9PA6NNJ1 464 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 TMEM14DPA8MWL7 114 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 SLC17A2O00624 439 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 HSD17B6O14756 317 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 DENRO43583 198 aaKnown RBP12.98□□□□□ -0.33
COL1A1-202ENST00000463440 HBZP02008 142 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 IGHV3-43DP0DP04 118 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 ARSBP15848 533 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 RCC1P18754 421 aaPredicted RBP12.98□□□□□ -0.33
COL1A1-202ENST00000463440 IL3RAP26951 378 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 CHATP28329 748 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 PSMD7P51665 324 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 UNC119Q13432 240 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 RAB11BQ15907 218 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 OR2W3Q7Z3T1 314 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 ZNF554Q86TJ5 538 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 PRR18Q8N4B5 295 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 DRAM1Q8N682 238 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 OR56B4Q8NH76 319 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 URM1Q9BTM9 101 aaKnown RBP12.98□□□□□ -0.33
COL1A1-202ENST00000463440 TAF9BQ9HBM6 251 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 TRRAPQ9Y4A5 3859 aa12.98□□□□□ -0.33
COL1A1-202ENST00000463440 WNK1Q9H4A3 2382 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 CCRL2O00421 344 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 FBXO24O75426 580 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 GAPDHP04406 335 aaKnown RBP12.97□□□□□ -0.33
COL1A1-202ENST00000463440 SNRNP70P08621 437 aaKnown RBP12.97□□□□□ -0.33
COL1A1-202ENST00000463440 CSF1P09603 554 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 QRFPP83859 136 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 EMX1Q04741 257 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-202ENST00000463440 ZNF816Q0VGE8 651 aaPredicted RBP12.97□□□□□ -0.33
COL1A1-202ENST00000463440 DIAPH2-AS1Q14236 149 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 HES1Q14469 280 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 P2RY14Q15391 338 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 SSX1Q16384 188 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 Q6ZS46 218 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 OR1L1Q8NH94 360 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 MRPL30Q8TCC3 161 aaKnown RBP12.97□□□□□ -0.33
COL1A1-202ENST00000463440 GFI1Q99684 422 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 SULT4A1Q9BR01 284 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 FAAP24Q9BTP7 215 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 YTHDF1Q9BYJ9 559 aaKnown RBP12.97□□□□□ -0.33
COL1A1-202ENST00000463440 KCNK15Q9H427 330 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 MBNL3Q9NUK0 354 aaKnown RBP12.97□□□□□ -0.33
COL1A1-202ENST00000463440 MOB4Q9Y3A3 225 aa12.97□□□□□ -0.33
COL1A1-202ENST00000463440 TSPAN15O95858 294 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 LPLP06858 475 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 TMEM11P17152 192 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 BLVRBP30043 206 aaPredicted RBP12.96□□□□□ -0.33
COL1A1-202ENST00000463440 ABCA11PQ4W5N1 156 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 FBLN7Q53RD9 439 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 C6orf201Q7Z4U5 140 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 OR10V1Q8NGI7 309 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 NICN1Q9BSH3 213 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 WNT10AQ9GZT5 417 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 OR2S2Q9NQN1 319 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 PLEKHJ1Q9NW61 149 aa12.96□□□□□ -0.33
COL1A1-202ENST00000463440 NDUFB11Q9NX14 153 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms