RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CALYQ9NYX4 217 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 KCNIP1Q9NZI2 227 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 TBC1D24Q9ULP9 559 aa11.8□□□□□ -0.52
COL6A1-202ENST00000463060 CR1P17927 2039 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 TRBV6-7A0A0A0MS04 114 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 MMP23AO75900 390 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 CCL3L1P16619 93 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 HRH1P35367 487 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 RFX2P48378 723 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 LOXL3P58215 753 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 TAS2R46P59540 309 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 AP3S2P59780 193 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 LCN2P80188 198 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 HTD2P86397 168 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 CDK10Q15131 360 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF660Q6AZW8 331 aaPredicted RBP11.79□□□□□ -0.52
COL6A1-202ENST00000463060 STEAP1BQ6NZ63 245 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 DHRS11Q6UWP2 260 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 C1orf122Q6ZSJ8 110 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 FAM185AQ8N0U4 392 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 OR10A7Q8NGE5 316 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 OR4D10Q8NGI6 311 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 RFESDQ8TAC1 157 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 ZNF714Q96N38 554 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 TINAGL1Q9GZM7 467 aaPredicted RBP11.79□□□□□ -0.52
COL6A1-202ENST00000463060 HRASLSQ9HDD0 168 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 MMP26Q9NRE1 261 aa11.79□□□□□ -0.52
COL6A1-202ENST00000463060 IGHV2-70DA0A0C4DH43 119 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 M0QYG6 137 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 PMP2P02689 132 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 RBP4P02753 201 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 LIPFP07098 398 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 CTXN2P0C2S0 81 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 AKAIN1P0CW23 69 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 ERVFRD-1P60508 538 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 ASAH1Q13510 395 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 DCTN2Q13561 401 aaKnown RBP11.78□□□□□ -0.52
COL6A1-202ENST00000463060 ACTBL2Q562R1 376 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 HEPN1Q6WQI6 88 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 Q8N7P7 452 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 OR52M1Q8NGK5 317 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 OR4C16Q8NGL9 310 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 UBALD1Q8TB05 177 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 ZFAND2BQ8WV99 257 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 GALMQ96C23 342 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 KIRREL1Q96J84 757 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 ITPR3Q14573 2671 aa11.78□□□□□ -0.52
COL6A1-202ENST00000463060 M0R1W7 72 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 SDCBPO00560 298 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-202ENST00000463060 SPINT2O43291 252 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 ENSAO43768 121 aaKnown RBP11.77□□□□□ -0.53
COL6A1-202ENST00000463060 TUSC2O75896 110 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 RAB3DO95716 219 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 FPR2P25090 351 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 BTCP35070 178 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 ARPC4P59998 168 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 TMEM30BQ3MIR4 351 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 CHRFAM7AQ494W8 412 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 LY6G6FQ5SQ64 297 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 UTF1Q5T230 341 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 ZNF57Q68EA5 555 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-202ENST00000463060 FAM53AQ6NSI3 398 aaPredicted RBP11.77□□□□□ -0.53
COL6A1-202ENST00000463060 KIR3DL3Q8N743 410 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 OR5H2Q8NGV7 314 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 GIMAP1Q8WWP7 306 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 SLC6A7Q99884 636 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 C7orf50Q9BRJ6 194 aaKnown RBP11.77□□□□□ -0.53
COL6A1-202ENST00000463060 GAL3ST2Q9H3Q3 398 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 UNKLQ9H9P5 680 aaKnown RBP11.77□□□□□ -0.53
COL6A1-202ENST00000463060 NECAP2Q9NVZ3 263 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.53
COL6A1-202ENST00000463060 A0A1W2PPH5 198 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 B4DSR2 109 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 MSMBP08118 114 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 OR5H8P0DN80 308 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 IGHV4-31P0DP07 118 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 OMGP23515 440 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 OR3A3P47888 321 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 PAX8Q06710 450 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 MEF2DQ14814 521 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 RNASE10Q5GAN6 216 aaKnown RBP11.76□□□□□ -0.53
COL6A1-202ENST00000463060 FAAP20Q6NZ36 180 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 C16orf87Q6PH81 154 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 H1FOOQ8IZA3 346 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-202ENST00000463060 CIARTQ8N365 385 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-202ENST00000463060 ARRDC1Q8N5I2 433 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 MAPK1IP1LQ8NDC0 245 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 OR52L2PQ8NGH6 319 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 OR56B4Q8NH76 319 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 COX4I2Q96KJ9 171 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 C11orf54Q9H0W9 315 aaPredicted RBP11.76□□□□□ -0.53
COL6A1-202ENST00000463060 SIRPDQ9H106 197 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 RAB9BQ9NP90 201 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 GFOD1Q9NXC2 390 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 SLC2A8Q9NY64 477 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 INSIG2Q9Y5U4 225 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 KPTNQ9Y664 436 aa11.76□□□□□ -0.53
COL6A1-202ENST00000463060 A0A087X0M5 115 aa11.75□□□□□ -0.53
COL6A1-202ENST00000463060 LINC00854A0A1B0GVQ3 168 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms