RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 FER1L6-AS2Q96M78 137 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 PKIBQ9C010 78 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 PUS1Q9Y606 427 aaKnown RBP eCLIP14.39□□□□□ -0.113e-13■□□□□ 8.3
ACTB-207ENST00000462494 TRBV6-6A0A0A6YYG2 114 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 ZNF98A6NK75 572 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 A6NLC8 198 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 C1orf196B1AJZ1 125 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 ARG1P05089 322 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 CELA3BP08861 270 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 PTAFRP25105 342 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 BAXQ07812 192 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 MYPOPQ86VE0 399 aaPredicted RBP14.39□□□□□ -0.11
ACTB-207ENST00000462494 OR10V1Q8NGI7 309 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 IL22RA2Q969J5 263 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 WDYHV1Q96HA8 205 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 C12orf57Q99622 126 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 SPRR3Q9UBC9 169 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 PPP1R3CQ9UQK1 317 aa14.39□□□□□ -0.11
ACTB-207ENST00000462494 TRGV5A0A0B4J1U4 118 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 RBFOX3A6NFN3 312 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 J3QT63 122 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 FOLR2P14207 255 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 ZNF16P17020 682 aaPredicted RBP14.38□□□□□ -0.11
ACTB-207ENST00000462494 PAX9P55771 341 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 HAGHQ16775 308 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 TBC1D28Q2M2D7 210 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 SOHLH1Q5JUK2 328 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 ZNF880Q6PDB4 577 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 RTL8AQ9BWD3 113 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 TRAPPC2LQ9UL33 140 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 RNF115Q9Y4L5 304 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 CDX4O14627 284 aaPredicted RBP14.38□□□□□ -0.11
ACTB-207ENST00000462494 MMP9P14780 707 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 PAX6P26367 422 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 ERVS71-1P61550 626 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 SNRPEP62304 92 aaKnown RBP14.38□□□□□ -0.11
ACTB-207ENST00000462494 ARG2P78540 354 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 TMEM267Q0VDI3 215 aaPredicted RBP14.38□□□□□ -0.11
ACTB-207ENST00000462494 RNFT1Q5M7Z0 435 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 AKR1C8PQ5T2L2 129 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 SLC25A24Q6NUK1 477 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 Q6P435 159 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 SFT2D1Q8WV19 159 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 GNPNAT1Q96EK6 184 aaPredicted RBP14.38□□□□□ -0.11
ACTB-207ENST00000462494 BCL2L14Q9BZR8 327 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 OR2J1Q9GZK6 312 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 KCNS2Q9ULS6 477 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 MED12LQ86YW9 2145 aa14.38□□□□□ -0.11
ACTB-207ENST00000462494 OR2H2O95918 312 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 MT-ND4LP03901 98 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 SULT1A1P50225 295 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 HES3Q5TGS1 186 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 SHEQ5VZ18 495 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 SPSB3Q6PJ21 355 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 TMPRSS7Q7RTY8 843 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 WDR86Q86TI4 376 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 STX12Q86Y82 276 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 SCCPDHQ8NBX0 429 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 ATP5SQ99766 215 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 CABLES2Q9BTV7 478 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 EGLN1Q9GZT9 426 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 hCG_1809904A0A1W2PP81 198 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 A0A1W2PPE2 198 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 A0A1W2PR64 198 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 A0A1W2PRV1 198 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 IDH3GP51553 393 aaPredicted RBP14.37□□□□□ -0.11
ACTB-207ENST00000462494 RPL23AP62750 156 aaKnown RBP14.37□□□□□ -0.11
ACTB-207ENST00000462494 FAM24BQ8N5W8 94 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 OR1J1Q8NGS3 322 aa14.37□□□□□ -0.11
ACTB-207ENST00000462494 PRRC2CQ9Y520 2896 aaKnown RBP14.36□□□□□ -0.11
ACTB-207ENST00000462494 A0A1B0GU03 582 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 CDIPTO14735 213 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 RHEBQ15382 184 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 ZNF766Q5HY98 468 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 Q6ZRM9 215 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 KDF1Q8NAX2 398 aaPredicted RBP14.36□□□□□ -0.11
ACTB-207ENST00000462494 SNIP1Q8TAD8 396 aaKnown RBP14.36□□□□□ -0.11
ACTB-207ENST00000462494 GP6Q9HCN6 339 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 COA4Q9NYJ1 87 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 CACNG5Q9UF02 275 aa14.36□□□□□ -0.11
ACTB-207ENST00000462494 A0A1B0GW64 132 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 NXPH2O95156 264 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 CNOT4O95628 575 aaKnown RBP14.35□□□□□ -0.11
ACTB-207ENST00000462494 S100A6P06703 90 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 IAPPP10997 89 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 PPP1CBP62140 327 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 PMP22Q01453 160 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 TESK1Q15569 626 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 ALKBH6Q3KRA9 238 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 THNSL2Q86YJ6 484 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 GCNT2Q8N0V5 402 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 LRP5LA4QPB2 252 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 SMPD2O60906 423 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 WDR1O75083 606 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 IGLV2-14P01704 120 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 GRPP07492 148 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 SELEP16581 610 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 UBE2NP61088 152 aaKnown RBP14.35□□□□□ -0.11
ACTB-207ENST00000462494 IFT22Q9H7X7 185 aa14.35□□□□□ -0.11
ACTB-207ENST00000462494 TUBA4BQ9H853 241 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms